Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm37655-201ENSMUST00000193968 4123 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm37791-201ENSMUST00000195081 286 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm4248-201ENSMUST00000196905 316 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm2314-201ENSMUST00000200391 586 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm8774-201ENSMUST00000203621 692 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm45872-201ENSMUST00000209804 1584 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm36247-201ENSMUST00000211834 285 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim28Q62318 AC152951.1-201ENSMUST00000218907 266 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 AC173482.1-201ENSMUST00000224494 3815 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim28Q62318 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Trim28Q62318 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim28Q62318 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim28Q62318 Gm22444-201ENSMUST00000093693 108 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim28Q62318 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.27□□□□□ -1.57
Trim28Q62318 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim28Q62318 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim28Q62318 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Trim28Q62318 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim28Q62318 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim28Q62318 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Trim28Q62318 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim28Q62318 Gm23271-201ENSMUST00000104052 124 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Trim28Q62318 Gm11325-201ENSMUST00000119967 469 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Gm16445-201ENSMUST00000120399 714 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Gm5646-201ENSMUST00000120568 714 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Gm22452-201ENSMUST00000122804 104 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim28Q62318 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Trim28Q62318 Gm26320-201ENSMUST00000157742 306 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Gm23352-201ENSMUST00000158428 64 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Gm16566-201ENSMUST00000160387 910 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Trbv10-201ENSMUST00000168322 289 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Mir3058-201ENSMUST00000175126 91 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Trim28Q62318 Gm15143-201ENSMUST00000178180 714 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Trim28Q62318 Mir713-201ENSMUST00000178651 108 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim28Q62318 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim28Q62318 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC5.26□□□□□ -1.57
Trim28Q62318 Gm28008-201ENSMUST00000184021 186 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Gm44472-201ENSMUST00000204922 943 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim28Q62318 Gm18487-201ENSMUST00000215826 878 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim28Q62318 AC167140.1-201ENSMUST00000224710 403 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 AC163646.2-201ENSMUST00000227962 141 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 AC144798.1-201ENSMUST00000228120 391 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Trim28Q62318 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim28Q62318 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim28Q62318 Gm23302-201ENSMUST00000082710 100 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim28Q62318 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim28Q62318 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim28Q62318 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim28Q62318 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim28Q62318 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Trim28Q62318 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.26□□□□□ -1.57
Trim28Q62318 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim28Q62318 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim28Q62318 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.25□□□□□ -1.57
Trim28Q62318 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim28Q62318 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim28Q62318 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Gm6584-201ENSMUST00000119671 447 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Gm14574-201ENSMUST00000120644 279 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Gm25434-201ENSMUST00000158278 167 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Gm20673-201ENSMUST00000177167 430 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Gm21815-201ENSMUST00000178213 664 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Gm24969-201ENSMUST00000180331 79 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim28Q62318 Gm27522-201ENSMUST00000183949 230 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Gm42465-201ENSMUST00000197036 492 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Gm42428-201ENSMUST00000198677 302 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC5.25□□□□□ -1.57
Trim28Q62318 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim28Q62318 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC5.25□□□□□ -1.57
Trim28Q62318 Gm29920-201ENSMUST00000206876 754 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Gm39197-201ENSMUST00000212069 457 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 AC166343.1-201ENSMUST00000213261 577 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.25□□□□□ -1.57
Trim28Q62318 Gm5023-201ENSMUST00000217442 587 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC5.25□□□□□ -1.57
Trim28Q62318 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.25□□□□□ -1.57
Trim28Q62318 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.25□□□□□ -1.57
Trim28Q62318 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms