Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm28629-201ENSMUST00000187309 263 ntBASIC3.24□□□□□ -1.89
Col11a1Q61245 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col11a1Q61245 Gm43264-201ENSMUST00000202284 325 ntBASIC3.24□□□□□ -1.89
Col11a1Q61245 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.24□□□□□ -1.89
Col11a1Q61245 Diaph3-206ENSMUST00000226745 713 ntBASIC3.24□□□□□ -1.89
Col11a1Q61245 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.24□□□□□ -1.89
Col11a1Q61245 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Col11a1Q61245 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col11a1Q61245 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col11a1Q61245 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
Col11a1Q61245 Gm11387-201ENSMUST00000120266 772 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm25116-201ENSMUST00000157191 122 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm24443-201ENSMUST00000157242 132 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm28534-201ENSMUST00000187744 676 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm45013-201ENSMUST00000206883 178 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm45710-201ENSMUST00000212847 215 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Mir99a-201ENSMUST00000083596 65 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm10343-201ENSMUST00000096279 348 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col11a1Q61245 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm12090-201ENSMUST00000118692 758 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.23□□□□□ -1.89
Col11a1Q61245 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm45252-201ENSMUST00000211579 397 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.23□□□□□ -1.89
Col11a1Q61245 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col11a1Q61245 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col11a1Q61245 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.22□□□□□ -1.89
Col11a1Q61245 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col11a1Q61245 Gm24120-201ENSMUST00000103978 129 ntBASIC3.22□□□□□ -1.89
Col11a1Q61245 Gm14659-201ENSMUST00000117667 843 ntBASIC3.22□□□□□ -1.89
Col11a1Q61245 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col11a1Q61245 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.22□□□□□ -1.89
Col11a1Q61245 Gm27648-201ENSMUST00000184315 107 ntBASIC3.22□□□□□ -1.89
Col11a1Q61245 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.22□□□□□ -1.89
Col11a1Q61245 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.22□□□□□ -1.89
Col11a1Q61245 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col11a1Q61245 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.22□□□□□ -1.89
Col11a1Q61245 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col11a1Q61245 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col11a1Q61245 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.22□□□□□ -1.89
Col11a1Q61245 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.22□□□□□ -1.89
Col11a1Q61245 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.22□□□□□ -1.89
Col11a1Q61245 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col11a1Q61245 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col11a1Q61245 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Col11a1Q61245 Gm12598-201ENSMUST00000117333 830 ntBASIC3.21□□□□□ -1.89
Col11a1Q61245 Gm14593-201ENSMUST00000119948 294 ntBASIC3.21□□□□□ -1.89
Col11a1Q61245 Gm26983-201ENSMUST00000182051 388 ntBASIC3.21□□□□□ -1.89
Col11a1Q61245 Gm19086-201ENSMUST00000190772 665 ntBASIC3.21□□□□□ -1.89
Col11a1Q61245 Gm37377-201ENSMUST00000191733 304 ntBASIC3.21□□□□□ -1.89
Col11a1Q61245 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.21□□□□□ -1.89
Col11a1Q61245 Gm38041-201ENSMUST00000194445 661 ntBASIC3.21□□□□□ -1.89
Col11a1Q61245 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.21□□□□□ -1.89
Col11a1Q61245 Gm44844-201ENSMUST00000207242 336 ntBASIC3.21□□□□□ -1.89
Col11a1Q61245 Gm18921-201ENSMUST00000221798 366 ntBASIC3.21□□□□□ -1.89
Col11a1Q61245 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Col11a1Q61245 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.21□□□□□ -1.89
Col11a1Q61245 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.21□□□□□ -1.9
Col11a1Q61245 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col11a1Q61245 Mir499-201ENSMUST00000102357 79 ntBASIC3.21□□□□□ -1.9
Col11a1Q61245 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.21□□□□□ -1.9
Col11a1Q61245 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC3.21□□□□□ -1.9
Col11a1Q61245 Gm37703-201ENSMUST00000192292 1784 ntBASIC3.21□□□□□ -1.9
Col11a1Q61245 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col11a1Q61245 Gm37111-201ENSMUST00000193250 634 ntBASIC3.21□□□□□ -1.9
Col11a1Q61245 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col11a1Q61245 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.21□□□□□ -1.9
Col11a1Q61245 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col11a1Q61245 Gm14578-201ENSMUST00000122166 391 ntBASIC3.2□□□□□ -1.9
Col11a1Q61245 Gm18953-201ENSMUST00000175694 300 ntBASIC3.2□□□□□ -1.9
Col11a1Q61245 Mir7013-201ENSMUST00000183540 72 ntBASIC3.2□□□□□ -1.9
Col11a1Q61245 Gm2427-201ENSMUST00000189121 881 ntBASIC3.2□□□□□ -1.9
Col11a1Q61245 Gm2719-201ENSMUST00000191929 444 ntBASIC3.2□□□□□ -1.9
Col11a1Q61245 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.2□□□□□ -1.9
Col11a1Q61245 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Col11a1Q61245 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col11a1Q61245 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm13532-201ENSMUST00000120373 240 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm13511-201ENSMUST00000121167 363 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm24937-201ENSMUST00000122597 134 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm27700-201ENSMUST00000185003 81 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm28594-201ENSMUST00000187022 661 ntBASIC3.19□□□□□ -1.9
Col11a1Q61245 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms