Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Usf1Q61069 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.28□□□□□ -1.88
Usf1Q61069 Gm22208-201ENSMUST00000122658 110 ntBASIC3.28□□□□□ -1.88
Usf1Q61069 Gm26027-201ENSMUST00000122725 268 ntBASIC3.28□□□□□ -1.88
Usf1Q61069 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Usf1Q61069 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Usf1Q61069 Gm15279-201ENSMUST00000155593 288 ntBASIC3.28□□□□□ -1.88
Usf1Q61069 Gm6486-201ENSMUST00000166202 434 ntBASIC3.28□□□□□ -1.88
Usf1Q61069 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.28□□□□□ -1.88
Usf1Q61069 Gm29064-201ENSMUST00000187014 813 ntBASIC3.28□□□□□ -1.88
Usf1Q61069 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Usf1Q61069 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Usf1Q61069 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.28□□□□□ -1.88
Usf1Q61069 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.28□□□□□ -1.88
Usf1Q61069 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Usf1Q61069 Gm7540-201ENSMUST00000219764 926 ntBASIC3.28□□□□□ -1.88
Usf1Q61069 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.28□□□□□ -1.88
Usf1Q61069 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Usf1Q61069 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.28□□□□□ -1.88
Usf1Q61069 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Usf1Q61069 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Usf1Q61069 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.28□□□□□ -1.88
Usf1Q61069 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Usf1Q61069 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
Usf1Q61069 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usf1Q61069 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Usf1Q61069 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Usf1Q61069 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Usf1Q61069 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Usf1Q61069 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usf1Q61069 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Usf1Q61069 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Usf1Q61069 Gm14811-201ENSMUST00000117070 117 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Gm14622-201ENSMUST00000117117 468 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Gm13803-201ENSMUST00000117547 489 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Gm12507-201ENSMUST00000119155 415 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Gm14554-201ENSMUST00000119548 661 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Gm13865-201ENSMUST00000120957 865 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.27□□□□□ -1.89
Usf1Q61069 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.27□□□□□ -1.89
Usf1Q61069 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Gm7094-201ENSMUST00000178379 366 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Usf1Q61069 Gm43232-201ENSMUST00000201346 364 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC3.27□□□□□ -1.89
Usf1Q61069 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Usf1Q61069 Gm45735-201ENSMUST00000212779 319 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Usf1Q61069 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Gm8681-201ENSMUST00000219115 618 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.27□□□□□ -1.89
Usf1Q61069 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
Usf1Q61069 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usf1Q61069 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Usf1Q61069 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usf1Q61069 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usf1Q61069 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.27□□□□□ -1.89
Usf1Q61069 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usf1Q61069 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usf1Q61069 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Usf1Q61069 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.27□□□□□ -1.89
Usf1Q61069 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usf1Q61069 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Usf1Q61069 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Usf1Q61069 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Usf1Q61069 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Usf1Q61069 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Usf1Q61069 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Usf1Q61069 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Usf1Q61069 Gm12156-201ENSMUST00000119188 554 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 Gm7308-201ENSMUST00000121087 447 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.26□□□□□ -1.89
Usf1Q61069 Gm24059-201ENSMUST00000157493 312 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 Gm3851-201ENSMUST00000168653 318 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Usf1Q61069 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Usf1Q61069 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.26□□□□□ -1.89
Usf1Q61069 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Usf1Q61069 Gm10925-201ENSMUST00000189941 678 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 Gm29038-201ENSMUST00000191543 678 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.26□□□□□ -1.89
Usf1Q61069 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.26□□□□□ -1.89
Usf1Q61069 Gm18900-201ENSMUST00000193218 584 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 Gm42850-201ENSMUST00000202094 201 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 Gm43932-201ENSMUST00000204499 52 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 AC153522.1-201ENSMUST00000220047 1090 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 Gm8785-201ENSMUST00000220259 487 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.26□□□□□ -1.89
Usf1Q61069 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.26□□□□□ -1.89
Usf1Q61069 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Usf1Q61069 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Usf1Q61069 Gm4987-201ENSMUST00000078326 408 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms