Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm25169-201ENSMUST00000104190 129 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Mir1198-201ENSMUST00000116995 121 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm6429-201ENSMUST00000117144 475 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm11408-201ENSMUST00000117889 519 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm6373-201ENSMUST00000121026 360 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm26045-201ENSMUST00000157862 97 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm25981-201ENSMUST00000157921 295 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm23387-201ENSMUST00000158586 107 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm9613-201ENSMUST00000171662 196 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm26141-201ENSMUST00000175299 126 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm24969-201ENSMUST00000180331 79 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Mir6413-201ENSMUST00000184049 108 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm28002-201ENSMUST00000184832 100 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm28724-202ENSMUST00000194218 295 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm42621-201ENSMUST00000198114 275 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm44404-201ENSMUST00000203979 636 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm18585-201ENSMUST00000215197 556 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 AC152946.2-201ENSMUST00000219071 337 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm7540-201ENSMUST00000219764 926 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 AC155929.1-201ENSMUST00000220217 1276 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm7119-201ENSMUST00000221345 695 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm18338-201ENSMUST00000222381 560 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm25699-201ENSMUST00000082896 167 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trav6-3Q5R1E6 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Trav6-3Q5R1E6 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
Trav6-3Q5R1E6 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC2.65□□□□□ -1.98
Trav6-3Q5R1E6 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
Trav6-3Q5R1E6 Gm12010-201ENSMUST00000122400 2017 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm23063-201ENSMUST00000102350 93 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm14607-201ENSMUST00000119119 491 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm14368-201ENSMUST00000145305 415 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm26001-201ENSMUST00000157989 103 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm23385-201ENSMUST00000158592 295 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm17204-201ENSMUST00000167936 478 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm24754-201ENSMUST00000177997 107 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm25412-201ENSMUST00000180258 107 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm27834-201ENSMUST00000183427 125 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Mir6986-201ENSMUST00000184483 58 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm19637-201ENSMUST00000185933 579 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm28552-201ENSMUST00000190725 388 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm5731-201ENSMUST00000190969 481 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm38214-201ENSMUST00000192581 988 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm37993-201ENSMUST00000195301 988 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm18433-202ENSMUST00000195682 196 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm29704-201ENSMUST00000196011 253 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm44349-201ENSMUST00000197048 123 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm43228-201ENSMUST00000200735 264 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm44583-201ENSMUST00000207478 281 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm44954-201ENSMUST00000208513 227 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm39147-201ENSMUST00000211376 465 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 AC132384.5-201ENSMUST00000218562 226 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 AC099578.1-201ENSMUST00000220147 435 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 AC108416.2-201ENSMUST00000226792 367 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 AC121542.1-201ENSMUST00000227245 721 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.65□□□□□ -1.99
Trav6-3Q5R1E6 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms