Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm3053-201ENSMUST00000161709 616 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm5258-201ENSMUST00000165437 327 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm20397-201ENSMUST00000174520 362 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm6214-201ENSMUST00000178845 541 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm27588-201ENSMUST00000185096 263 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm38046-201ENSMUST00000192733 550 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm37070-201ENSMUST00000193272 460 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Trbv8-201ENSMUST00000194020 285 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm42566-201ENSMUST00000197120 643 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm43825-201ENSMUST00000199650 734 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ssrp1Q08943 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm45588-201ENSMUST00000211213 630 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm18850-201ENSMUST00000211578 388 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm10916-201ENSMUST00000080330 483 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm22508-201ENSMUST00000082772 110 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ssrp1Q08943 Gm37903-201ENSMUST00000192122 2381 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ssrp1Q08943 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm23133-201ENSMUST00000104255 135 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm23594-201ENSMUST00000104307 134 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ssrp1Q08943 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ssrp1Q08943 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ssrp1Q08943 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm12571-201ENSMUST00000118132 243 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm8757-201ENSMUST00000119660 372 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm13007-201ENSMUST00000121866 365 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm23743-201ENSMUST00000157389 274 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm23028-201ENSMUST00000158773 265 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm9443-201ENSMUST00000188406 816 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm38076-201ENSMUST00000193889 450 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm44295-201ENSMUST00000203805 437 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC5.02□□□□□ -1.61
Ssrp1Q08943 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm17779-201ENSMUST00000213395 394 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ssrp1Q08943 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC5.02□□□□□ -1.61
Ssrp1Q08943 AC153662.1-201ENSMUST00000222220 270 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 AC173481.1-201ENSMUST00000223351 270 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ssrp1Q08943 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm22572-201ENSMUST00000082985 105 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm24765-201ENSMUST00000083691 103 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ssrp1Q08943 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm44542-201ENSMUST00000208677 4314 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ssrp1Q08943 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.02□□□□□ -1.61
Ssrp1Q08943 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ssrp1Q08943 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ssrp1Q08943 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ssrp1Q08943 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ssrp1Q08943 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ssrp1Q08943 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Ssrp1Q08943 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Ssrp1Q08943 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm15766-201ENSMUST00000118025 813 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm3362-201ENSMUST00000148102 466 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm24636-201ENSMUST00000158673 288 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm16545-201ENSMUST00000161968 463 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm17086-201ENSMUST00000171346 484 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm26335-201ENSMUST00000178449 107 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm28843-201ENSMUST00000189198 678 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm29546-201ENSMUST00000191171 678 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm18403-201ENSMUST00000192907 529 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm37757-201ENSMUST00000193072 210 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm8158-201ENSMUST00000219220 465 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 Gm8112-201ENSMUST00000219637 465 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.01□□□□□ -1.61
Ssrp1Q08943 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms