Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col17a1Q07563 Trav5d-2-201ENSMUST00000196107 275 ntBASIC6.17□□□□□ -1.42
Col17a1Q07563 Gm43856-201ENSMUST00000197004 369 ntBASIC6.17□□□□□ -1.42
Col17a1Q07563 Trav5n-2-201ENSMUST00000197136 275 ntBASIC6.17□□□□□ -1.42
Col17a1Q07563 Gm43717-201ENSMUST00000198684 310 ntBASIC6.17□□□□□ -1.42
Col17a1Q07563 Gm44088-201ENSMUST00000204595 237 ntBASIC6.17□□□□□ -1.42
Col17a1Q07563 Gm7039-201ENSMUST00000205138 346 ntBASIC6.17□□□□□ -1.42
Col17a1Q07563 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col17a1Q07563 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col17a1Q07563 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.17□□□□□ -1.42
Col17a1Q07563 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col17a1Q07563 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC6.17□□□□□ -1.42
Col17a1Q07563 AL606472.1-201ENSMUST00000224628 275 ntBASIC6.17□□□□□ -1.42
Col17a1Q07563 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col17a1Q07563 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Col17a1Q07563 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Col17a1Q07563 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Col17a1Q07563 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col17a1Q07563 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Col17a1Q07563 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC6.17□□□□□ -1.42
Col17a1Q07563 Gm36927-201ENSMUST00000192504 1841 ntBASIC6.17□□□□□ -1.42
Col17a1Q07563 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC6.16□□□□□ -1.42
Col17a1Q07563 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col17a1Q07563 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col17a1Q07563 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col17a1Q07563 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Col17a1Q07563 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm14899-201ENSMUST00000118673 548 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm12578-201ENSMUST00000121244 417 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm24681-201ENSMUST00000158760 107 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm24225-201ENSMUST00000158825 98 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm27532-201ENSMUST00000183726 113 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm28628-201ENSMUST00000187006 264 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm37946-201ENSMUST00000192064 347 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm36998-201ENSMUST00000193205 704 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm32175-201ENSMUST00000193641 346 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm43308-201ENSMUST00000197236 373 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm7495-201ENSMUST00000215099 426 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm19709-201ENSMUST00000215403 482 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 AC159472.1-201ENSMUST00000218178 463 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 AC167140.1-201ENSMUST00000224710 403 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 AC124581.4-201ENSMUST00000225874 463 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Col17a1Q07563 Rny3-201ENSMUST00000083011 102 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm26111-201ENSMUST00000083969 106 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col17a1Q07563 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col17a1Q07563 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col17a1Q07563 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm42701-201ENSMUST00000196117 1657 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 AC167360.1-201ENSMUST00000222596 2494 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm13230-201ENSMUST00000120870 1575 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm43010-201ENSMUST00000195993 2878 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col17a1Q07563 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm37397-201ENSMUST00000194579 2842 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 AC122840.2-201ENSMUST00000221030 2659 ntBASIC6.16□□□□□ -1.42
Col17a1Q07563 Gm15126-201ENSMUST00000118631 833 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 Gm11254-201ENSMUST00000122368 653 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 Gm22452-201ENSMUST00000122804 104 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 Gm22601-201ENSMUST00000157595 250 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 Gm27796-201ENSMUST00000183863 261 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 Gm38050-201ENSMUST00000191904 238 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 Gm43295-201ENSMUST00000201439 412 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 AC116460.1-201ENSMUST00000219040 313 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC6.15□□□□□ -1.42
Col17a1Q07563 AL606513.1-201ENSMUST00000225369 579 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col17a1Q07563 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Col17a1Q07563 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col17a1Q07563 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col17a1Q07563 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col17a1Q07563 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col17a1Q07563 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col17a1Q07563 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.15□□□□□ -1.42
Col17a1Q07563 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col17a1Q07563 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Col17a1Q07563 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col17a1Q07563 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
Col17a1Q07563 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col17a1Q07563 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
Col17a1Q07563 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col17a1Q07563 Gm16216-201ENSMUST00000118970 1111 ntBASIC6.15□□□□□ -1.43
Col17a1Q07563 Gm11876-201ENSMUST00000120002 269 ntBASIC6.15□□□□□ -1.43
Col17a1Q07563 Gm15116-201ENSMUST00000122248 663 ntBASIC6.15□□□□□ -1.43
Col17a1Q07563 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC6.15□□□□□ -1.43
Col17a1Q07563 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col17a1Q07563 Gm24773-201ENSMUST00000158513 99 ntBASIC6.15□□□□□ -1.43
Col17a1Q07563 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col17a1Q07563 Spanxn4-201ENSMUST00000172433 424 ntBASIC6.15□□□□□ -1.43
Col17a1Q07563 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC6.15□□□□□ -1.43
Col17a1Q07563 Gm28358-202ENSMUST00000189292 223 ntBASIC6.15□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms