Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Col8a1Q00780 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Col8a1Q00780 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.34□□□□□ -1.72
Col8a1Q00780 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm26300-201ENSMUST00000102282 94 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm12245-201ENSMUST00000117266 357 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm12815-201ENSMUST00000121737 135 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm12872-201ENSMUST00000121835 320 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm14129-201ENSMUST00000122436 291 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm5963-201ENSMUST00000143451 236 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm24477-201ENSMUST00000157438 103 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm23993-201ENSMUST00000157478 144 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm23906-201ENSMUST00000157573 128 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm25454-201ENSMUST00000157947 315 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm23258-201ENSMUST00000158319 106 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm17062-201ENSMUST00000166987 461 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm22177-201ENSMUST00000175002 158 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm2092-201ENSMUST00000178887 639 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm2759-201ENSMUST00000179938 639 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm28283-201ENSMUST00000185509 178 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm4557-201ENSMUST00000185826 907 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm4526-201ENSMUST00000186039 920 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm8708-201ENSMUST00000188500 906 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm32447-201ENSMUST00000194265 697 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm43604-201ENSMUST00000199799 705 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm44083-201ENSMUST00000203114 337 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm21112-201ENSMUST00000212224 578 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 AC123067.1-201ENSMUST00000217711 462 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm18116-201ENSMUST00000220920 537 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Col8a1Q00780 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.33□□□□□ -1.72
Col8a1Q00780 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.33□□□□□ -1.72
Col8a1Q00780 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
Col8a1Q00780 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a1Q00780 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm37846-201ENSMUST00000191840 3774 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a1Q00780 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a1Q00780 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a1Q00780 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm12427-201ENSMUST00000117719 302 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm13880-201ENSMUST00000118421 474 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm15211-201ENSMUST00000118932 528 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm15206-201ENSMUST00000119143 454 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm25103-201ENSMUST00000122671 318 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.32□□□□□ -1.72
Col8a1Q00780 Zakit-201ENSMUST00000157677 308 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm22857-201ENSMUST00000174969 134 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm8649-201ENSMUST00000181799 233 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm27568-201ENSMUST00000184220 99 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm27148-201ENSMUST00000185086 160 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm38040-201ENSMUST00000193505 225 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm37336-202ENSMUST00000193705 468 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm43739-201ENSMUST00000198294 307 ntBASIC4.32□□□□□ -1.72
Col8a1Q00780 Gm45173-201ENSMUST00000206819 305 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms