Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Nkx3-1P97436 Gm43214-201ENSMUST00000199242 352 ntBASIC2.78□□□□□ -1.96
Nkx3-1P97436 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC2.78□□□□□ -1.96
Nkx3-1P97436 Gm45367-201ENSMUST00000210171 347 ntBASIC2.78□□□□□ -1.96
Nkx3-1P97436 AL669916.5-201ENSMUST00000214874 361 ntBASIC2.78□□□□□ -1.96
Nkx3-1P97436 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.78□□□□□ -1.96
Nkx3-1P97436 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.78□□□□□ -1.96
Nkx3-1P97436 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.78□□□□□ -1.96
Nkx3-1P97436 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.78□□□□□ -1.96
Nkx3-1P97436 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.78□□□□□ -1.96
Nkx3-1P97436 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Nkx3-1P97436 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Nkx3-1P97436 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Nkx3-1P97436 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Nkx3-1P97436 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.78□□□□□ -1.96
Nkx3-1P97436 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Nkx3-1P97436 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Nkx3-1P97436 AC116557.1-201ENSMUST00000219494 1521 ntBASIC2.78□□□□□ -1.97
Nkx3-1P97436 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm14885-201ENSMUST00000117969 496 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm12387-201ENSMUST00000118573 955 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm12090-201ENSMUST00000118692 758 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm16021-201ENSMUST00000121176 219 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm7855-201ENSMUST00000137737 687 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm22036-201ENSMUST00000157279 215 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm23716-201ENSMUST00000157348 144 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm22519-201ENSMUST00000158270 178 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm23583-201ENSMUST00000158533 289 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm16300-201ENSMUST00000160031 1279 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm27893-201ENSMUST00000184408 194 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm28113-201ENSMUST00000188280 229 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm43899-201ENSMUST00000203675 246 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.77□□□□□ -1.97
Nkx3-1P97436 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Nkx3-1P97436 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Nkx3-1P97436 Gm43443-201ENSMUST00000202337 2393 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 AC132336.1-201ENSMUST00000222844 1740 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm22939-201ENSMUST00000103958 131 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm26423-201ENSMUST00000104277 128 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm12568-201ENSMUST00000117362 624 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm13504-201ENSMUST00000117490 316 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm13379-201ENSMUST00000118053 621 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm15244-201ENSMUST00000121122 130 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm13471-201ENSMUST00000122057 433 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm15986-201ENSMUST00000122153 400 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Nkx3-1P97436 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm10075-201ENSMUST00000162030 545 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm18520-201ENSMUST00000174783 658 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Mir5127-201ENSMUST00000175295 71 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm37629-201ENSMUST00000193635 1050 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm6230-201ENSMUST00000208077 780 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 AC091783.4-201ENSMUST00000224940 611 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 AC154562.1-201ENSMUST00000226140 966 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm22249-201ENSMUST00000082485 136 ntBASIC2.76□□□□□ -1.97
Nkx3-1P97436 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Nkx3-1P97436 Gm5362-201ENSMUST00000211968 3085 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms