Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.8□□□□□ -1.64
SgcbP82349 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.8□□□□□ -1.64
SgcbP82349 Gm46369-201ENSMUST00000221577 401 ntBASIC4.8□□□□□ -1.64
SgcbP82349 Gm46997-201ENSMUST00000222108 217 ntBASIC4.8□□□□□ -1.64
SgcbP82349 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.8□□□□□ -1.64
SgcbP82349 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.8□□□□□ -1.64
SgcbP82349 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.8□□□□□ -1.64
SgcbP82349 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SgcbP82349 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SgcbP82349 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SgcbP82349 Gm23330-201ENSMUST00000082660 164 ntBASIC4.8□□□□□ -1.64
SgcbP82349 Gm23678-201ENSMUST00000083157 107 ntBASIC4.8□□□□□ -1.64
SgcbP82349 Gm23461-201ENSMUST00000083265 107 ntBASIC4.8□□□□□ -1.64
SgcbP82349 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SgcbP82349 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SgcbP82349 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SgcbP82349 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.8□□□□□ -1.64
SgcbP82349 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SgcbP82349 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SgcbP82349 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SgcbP82349 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SgcbP82349 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SgcbP82349 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SgcbP82349 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SgcbP82349 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SgcbP82349 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SgcbP82349 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SgcbP82349 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SgcbP82349 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SgcbP82349 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
SgcbP82349 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC4.79□□□□□ -1.64
SgcbP82349 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.79□□□□□ -1.64
SgcbP82349 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SgcbP82349 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SgcbP82349 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SgcbP82349 n-R5s202-201ENSMUST00000104517 114 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Mir875-201ENSMUST00000104698 78 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SgcbP82349 Gm14753-201ENSMUST00000118503 246 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SgcbP82349 Gm12650-201ENSMUST00000121966 258 ntBASIC4.79□□□□□ -1.64
SgcbP82349 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.79□□□□□ -1.64
SgcbP82349 n-R5s87-201ENSMUST00000122752 116 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Gm22219-201ENSMUST00000157562 319 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Gm23704-201ENSMUST00000158844 340 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Scarna10-201ENSMUST00000158992 325 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SgcbP82349 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.79□□□□□ -1.64
SgcbP82349 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SgcbP82349 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
SgcbP82349 Gm19206-201ENSMUST00000186401 827 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Gm28429-201ENSMUST00000188521 363 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Gm29665-201ENSMUST00000191457 528 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Gm37568-201ENSMUST00000191755 364 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.79□□□□□ -1.64
SgcbP82349 Gm6059-201ENSMUST00000196903 340 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Gm44825-201ENSMUST00000207557 150 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Gm44598-201ENSMUST00000207566 150 ntBASIC4.79□□□□□ -1.64
SgcbP82349 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.79□□□□□ -1.64
SgcbP82349 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.79□□□□□ -1.64
SgcbP82349 AC154583.1-201ENSMUST00000224788 655 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Gm25755-201ENSMUST00000083396 107 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Gm43857-201ENSMUST00000200343 3079 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SgcbP82349 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.79□□□□□ -1.64
SgcbP82349 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.79□□□□□ -1.64
SgcbP82349 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.79□□□□□ -1.64
SgcbP82349 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SgcbP82349 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SgcbP82349 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SgcbP82349 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
SgcbP82349 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SgcbP82349 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SgcbP82349 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SgcbP82349 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SgcbP82349 AC159896.3-201ENSMUST00000215904 3835 ntBASIC4.78□□□□□ -1.64
SgcbP82349 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SgcbP82349 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.78□□□□□ -1.64
SgcbP82349 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SgcbP82349 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
SgcbP82349 CT009510.2-203ENSMUST00000226704 2136 ntBASIC4.78□□□□□ -1.64
SgcbP82349 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SgcbP82349 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
SgcbP82349 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.78□□□□□ -1.64
SgcbP82349 Gm14774-201ENSMUST00000117857 536 ntBASIC4.78□□□□□ -1.64
SgcbP82349 Gm11975-201ENSMUST00000118772 481 ntBASIC4.78□□□□□ -1.64
SgcbP82349 Gm15428-201ENSMUST00000121352 333 ntBASIC4.78□□□□□ -1.64
SgcbP82349 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC4.78□□□□□ -1.64
SgcbP82349 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SgcbP82349 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.78□□□□□ -1.64
SgcbP82349 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.78□□□□□ -1.64
SgcbP82349 Gm27541-201ENSMUST00000184078 122 ntBASIC4.78□□□□□ -1.64
SgcbP82349 Gm5058-201ENSMUST00000187331 463 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms