Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm27427-201ENSMUST00000185134 193 ntBASIC3.98□□□□□ -1.77
NcanP55066 Gm36954-201ENSMUST00000195362 363 ntBASIC3.98□□□□□ -1.77
NcanP55066 Gm5983-201ENSMUST00000197739 770 ntBASIC3.98□□□□□ -1.77
NcanP55066 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NcanP55066 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.98□□□□□ -1.77
NcanP55066 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NcanP55066 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.98□□□□□ -1.77
NcanP55066 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.98□□□□□ -1.77
NcanP55066 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.98□□□□□ -1.77
NcanP55066 AC122397.2-201ENSMUST00000227422 686 ntBASIC3.98□□□□□ -1.77
NcanP55066 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NcanP55066 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.98□□□□□ -1.77
NcanP55066 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NcanP55066 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NcanP55066 Gm24626-201ENSMUST00000082621 161 ntBASIC3.98□□□□□ -1.77
NcanP55066 Mir325-201ENSMUST00000083491 98 ntBASIC3.98□□□□□ -1.77
NcanP55066 Gm23104-201ENSMUST00000083722 104 ntBASIC3.98□□□□□ -1.77
NcanP55066 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.98□□□□□ -1.77
NcanP55066 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NcanP55066 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NcanP55066 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NcanP55066 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NcanP55066 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.98□□□□□ -1.77
NcanP55066 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NcanP55066 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
NcanP55066 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC3.97□□□□□ -1.77
NcanP55066 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NcanP55066 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NcanP55066 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.97□□□□□ -1.77
NcanP55066 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.97□□□□□ -1.77
NcanP55066 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NcanP55066 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NcanP55066 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NcanP55066 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.97□□□□□ -1.77
NcanP55066 Gm13873-201ENSMUST00000119208 427 ntBASIC3.97□□□□□ -1.77
NcanP55066 Gm14162-201ENSMUST00000121985 601 ntBASIC3.97□□□□□ -1.77
NcanP55066 Gm25981-201ENSMUST00000157921 295 ntBASIC3.97□□□□□ -1.77
NcanP55066 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NcanP55066 Gm24969-201ENSMUST00000180331 79 ntBASIC3.97□□□□□ -1.77
NcanP55066 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.97□□□□□ -1.77
NcanP55066 Gm7897-201ENSMUST00000193981 554 ntBASIC3.97□□□□□ -1.77
NcanP55066 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3.97□□□□□ -1.77
NcanP55066 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.97□□□□□ -1.77
NcanP55066 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
NcanP55066 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC3.97□□□□□ -1.77
NcanP55066 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.97□□□□□ -1.77
NcanP55066 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC3.97□□□□□ -1.77
NcanP55066 CT025538.2-201ENSMUST00000226083 772 ntBASIC3.97□□□□□ -1.77
NcanP55066 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.97□□□□□ -1.77
NcanP55066 Gm25403-201ENSMUST00000082971 143 ntBASIC3.97□□□□□ -1.77
NcanP55066 Mir410-201ENSMUST00000083563 81 ntBASIC3.97□□□□□ -1.77
NcanP55066 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.97□□□□□ -1.77
NcanP55066 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NcanP55066 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
NcanP55066 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.97□□□□□ -1.77
NcanP55066 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NcanP55066 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
NcanP55066 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC3.97□□□□□ -1.77
NcanP55066 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
NcanP55066 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.96□□□□□ -1.77
NcanP55066 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NcanP55066 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NcanP55066 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NcanP55066 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
NcanP55066 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.96□□□□□ -1.78
NcanP55066 Gm11913-201ENSMUST00000119094 336 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
NcanP55066 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm13131-201ENSMUST00000122228 321 ntBASIC3.96□□□□□ -1.78
NcanP55066 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC3.96□□□□□ -1.78
NcanP55066 Gm22186-201ENSMUST00000157822 122 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm22666-201ENSMUST00000158717 164 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm16134-201ENSMUST00000161714 336 ntBASIC3.96□□□□□ -1.78
NcanP55066 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NcanP55066 Mir3965-201ENSMUST00000175570 69 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm20693-201ENSMUST00000177431 211 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NcanP55066 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NcanP55066 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NcanP55066 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NcanP55066 Gm27522-201ENSMUST00000183949 230 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm27942-201ENSMUST00000184669 101 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm28113-201ENSMUST00000188280 229 ntBASIC3.96□□□□□ -1.78
NcanP55066 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NcanP55066 Gm29288-201ENSMUST00000191582 901 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.96□□□□□ -1.78
NcanP55066 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm5309-201ENSMUST00000197416 677 ntBASIC3.96□□□□□ -1.78
NcanP55066 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm43155-201ENSMUST00000202661 494 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm43979-201ENSMUST00000203179 475 ntBASIC3.96□□□□□ -1.78
NcanP55066 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm44521-201ENSMUST00000206469 217 ntBASIC3.96□□□□□ -1.78
NcanP55066 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.96□□□□□ -1.78
NcanP55066 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NcanP55066 Gm45252-201ENSMUST00000211579 397 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm45327-201ENSMUST00000211612 565 ntBASIC3.96□□□□□ -1.78
NcanP55066 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3.96□□□□□ -1.78
NcanP55066 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.96□□□□□ -1.78
NcanP55066 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms