Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Tnfsf4P43488 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Tnfsf4P43488 Gm43704-201ENSMUST00000196164 496 ntBASIC2.78□□□□□ -1.96
Tnfsf4P43488 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Tnfsf4P43488 Mir142-201ENSMUST00000198092 64 ntBASIC2.78□□□□□ -1.96
Tnfsf4P43488 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.78□□□□□ -1.96
Tnfsf4P43488 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.78□□□□□ -1.96
Tnfsf4P43488 Gm43932-201ENSMUST00000204499 52 ntBASIC2.78□□□□□ -1.96
Tnfsf4P43488 Gm45367-201ENSMUST00000210171 347 ntBASIC2.78□□□□□ -1.96
Tnfsf4P43488 Gm45588-201ENSMUST00000211213 630 ntBASIC2.78□□□□□ -1.96
Tnfsf4P43488 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Tnfsf4P43488 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Tnfsf4P43488 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Tnfsf4P43488 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Tnfsf4P43488 AC122840.2-201ENSMUST00000221030 2659 ntBASIC2.78□□□□□ -1.96
Tnfsf4P43488 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Tnfsf4P43488 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm15148-201ENSMUST00000117602 156 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm25883-201ENSMUST00000157781 271 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm25555-201ENSMUST00000158078 111 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm23583-201ENSMUST00000158533 289 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Mir6405-201ENSMUST00000184584 124 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm28872-201ENSMUST00000191518 158 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm37428-201ENSMUST00000193886 137 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm37290-201ENSMUST00000195775 339 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm44030-201ENSMUST00000204865 432 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm44972-201ENSMUST00000206419 406 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm44688-201ENSMUST00000209083 537 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm18487-201ENSMUST00000215826 878 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.77□□□□□ -1.97
Tnfsf4P43488 Gm12667-201ENSMUST00000118299 1332 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm22590-201ENSMUST00000104247 128 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm13349-201ENSMUST00000118436 411 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm12458-201ENSMUST00000119387 495 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm14162-201ENSMUST00000121985 601 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm11229-201ENSMUST00000121993 437 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm15367-201ENSMUST00000122398 1016 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm23895-201ENSMUST00000158108 160 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.76□□□□□ -1.97
Tnfsf4P43488 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm9775-201ENSMUST00000189402 331 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm30341-201ENSMUST00000194363 289 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm36985-201ENSMUST00000195595 379 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm43814-201ENSMUST00000197851 413 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm43440-201ENSMUST00000201957 729 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm44964-201ENSMUST00000207011 273 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC2.76□□□□□ -1.97
Tnfsf4P43488 AC154510.1-201ENSMUST00000223925 737 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm9765-201ENSMUST00000043170 321 ntBASIC2.76□□□□□ -1.97
Tnfsf4P43488 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Tnfsf4P43488 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Tnfsf4P43488 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Tnfsf4P43488 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC2.76□□□□□ -1.97
Tnfsf4P43488 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Tnfsf4P43488 Gm43320-201ENSMUST00000196047 2916 ntBASIC2.75□□□□□ -1.97
Tnfsf4P43488 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm11253-201ENSMUST00000118486 201 ntBASIC2.75□□□□□ -1.97
Tnfsf4P43488 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm14559-201ENSMUST00000121745 496 ntBASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm14389-201ENSMUST00000140453 241 ntBASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm24736-201ENSMUST00000158862 130 ntBASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm32340-201ENSMUST00000192883 259 ntBASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm19030-201ENSMUST00000194947 552 ntBASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm6064-201ENSMUST00000203999 454 ntBASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Tnfsf4P43488 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Tnfsf4P43488 AC117656.3-205ENSMUST00000224606 1205 ntBASIC2.75□□□□□ -1.97
Tnfsf4P43488 AC126275.2-201ENSMUST00000225224 253 ntBASIC2.75□□□□□ -1.97
Tnfsf4P43488 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.75□□□□□ -1.97
Tnfsf4P43488 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Tnfsf4P43488 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Tnfsf4P43488 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Tnfsf4P43488 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Tnfsf4P43488 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Tnfsf4P43488 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms