Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HttP42859 Gm6574-201ENSMUST00000120037 362 ntBASIC2.94□□□□□ -1.94
HttP42859 Gm26928-201ENSMUST00000182674 572 ntBASIC2.94□□□□□ -1.94
HttP42859 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.94□□□□□ -1.94
HttP42859 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HttP42859 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HttP42859 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
HttP42859 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HttP42859 Mir344e-201ENSMUST00000104677 66 ntBASIC2.94□□□□□ -1.94
HttP42859 Gm13122-201ENSMUST00000118380 453 ntBASIC2.94□□□□□ -1.94
HttP42859 Gm11285-201ENSMUST00000118443 322 ntBASIC2.94□□□□□ -1.94
HttP42859 Gm23889-201ENSMUST00000122689 104 ntBASIC2.94□□□□□ -1.94
HttP42859 Gm25069-201ENSMUST00000175238 86 ntBASIC2.94□□□□□ -1.94
HttP42859 Gm22264-201ENSMUST00000178200 107 ntBASIC2.94□□□□□ -1.94
HttP42859 Gm2979-201ENSMUST00000193442 463 ntBASIC2.94□□□□□ -1.94
HttP42859 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.94□□□□□ -1.94
HttP42859 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC2.94□□□□□ -1.94
HttP42859 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
HttP42859 Gm16383-201ENSMUST00000118122 232 ntBASIC2.93□□□□□ -1.94
HttP42859 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC2.93□□□□□ -1.94
HttP42859 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HttP42859 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.93□□□□□ -1.94
HttP42859 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.93□□□□□ -1.94
HttP42859 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HttP42859 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
HttP42859 Gm25421-201ENSMUST00000104218 164 ntBASIC2.93□□□□□ -1.94
HttP42859 Gm4596-201ENSMUST00000117197 442 ntBASIC2.93□□□□□ -1.94
HttP42859 Gm14793-201ENSMUST00000118739 311 ntBASIC2.93□□□□□ -1.94
HttP42859 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.93□□□□□ -1.94
HttP42859 Gm19253-201ENSMUST00000204279 307 ntBASIC2.93□□□□□ -1.94
HttP42859 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HttP42859 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HttP42859 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HttP42859 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HttP42859 Gm22752-201ENSMUST00000102083 109 ntBASIC2.93□□□□□ -1.94
HttP42859 Gm17711-201ENSMUST00000172028 237 ntBASIC2.93□□□□□ -1.94
HttP42859 Gm27158-201ENSMUST00000183813 238 ntBASIC2.93□□□□□ -1.94
HttP42859 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC2.93□□□□□ -1.94
HttP42859 Gm23927-201ENSMUST00000082466 215 ntBASIC2.93□□□□□ -1.94
HttP42859 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
HttP42859 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
HttP42859 Gm8995-201ENSMUST00000184842 7280 ntBASIC2.92□□□□□ -1.94
HttP42859 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.92□□□□□ -1.94
HttP42859 Gm43658-201ENSMUST00000202348 4176 ntBASIC2.92□□□□□ -1.94
HttP42859 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
HttP42859 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.92□□□□□ -1.94
HttP42859 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.92□□□□□ -1.94
HttP42859 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HttP42859 Gm27991-201ENSMUST00000184804 137 ntBASIC2.92□□□□□ -1.94
HttP42859 Gm5175-202ENSMUST00000219699 529 ntBASIC2.92□□□□□ -1.94
HttP42859 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HttP42859 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HttP42859 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
HttP42859 AC154313.1-201ENSMUST00000217755 3841 ntBASIC2.92□□□□□ -1.94
HttP42859 Gm12956-201ENSMUST00000122184 414 ntBASIC2.92□□□□□ -1.94
HttP42859 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HttP42859 Gm42758-201ENSMUST00000202146 283 ntBASIC2.92□□□□□ -1.94
HttP42859 AC122301.1-201ENSMUST00000219625 507 ntBASIC2.92□□□□□ -1.94
HttP42859 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HttP42859 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.92□□□□□ -1.94
HttP42859 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HttP42859 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.92□□□□□ -1.94
HttP42859 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HttP42859 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.91□□□□□ -1.94
HttP42859 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
HttP42859 Gm22803-201ENSMUST00000158049 283 ntBASIC2.91□□□□□ -1.94
HttP42859 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC2.91□□□□□ -1.94
HttP42859 Gm23714-201ENSMUST00000179259 105 ntBASIC2.91□□□□□ -1.94
HttP42859 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.91□□□□□ -1.94
HttP42859 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.91□□□□□ -1.94
HttP42859 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.91□□□□□ -1.94
HttP42859 Gm45498-201ENSMUST00000210346 283 ntBASIC2.91□□□□□ -1.94
HttP42859 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.91□□□□□ -1.94
HttP42859 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.91□□□□□ -1.94
HttP42859 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HttP42859 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HttP42859 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HttP42859 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
HttP42859 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HttP42859 Gm11943-201ENSMUST00000119473 327 ntBASIC2.91□□□□□ -1.94
HttP42859 Gm5396-201ENSMUST00000121222 532 ntBASIC2.91□□□□□ -1.94
HttP42859 Gm24436-201ENSMUST00000157889 302 ntBASIC2.91□□□□□ -1.94
HttP42859 Trbv10-201ENSMUST00000168322 289 ntBASIC2.91□□□□□ -1.94
HttP42859 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HttP42859 Gm43975-201ENSMUST00000203023 481 ntBASIC2.91□□□□□ -1.94
HttP42859 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HttP42859 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.91□□□□□ -1.94
HttP42859 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
HttP42859 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HttP42859 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
HttP42859 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
HttP42859 Gm17149-201ENSMUST00000164712 375 ntBASIC2.9□□□□□ -1.94
HttP42859 Gm28637-201ENSMUST00000179424 345 ntBASIC2.9□□□□□ -1.94
HttP42859 Gm37807-201ENSMUST00000194310 190 ntBASIC2.9□□□□□ -1.94
HttP42859 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.9□□□□□ -1.94
HttP42859 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.9□□□□□ -1.94
HttP42859 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
HttP42859 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
HttP42859 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
HttP42859 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms