Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm45209-201ENSMUST00000207122 353 ntBASIC4.55□□□□□ -1.68
LdlrP35951 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC4.55□□□□□ -1.68
LdlrP35951 Gm5917-201ENSMUST00000217638 721 ntBASIC4.55□□□□□ -1.68
LdlrP35951 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.55□□□□□ -1.68
LdlrP35951 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.55□□□□□ -1.68
LdlrP35951 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.55□□□□□ -1.68
LdlrP35951 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.55□□□□□ -1.68
LdlrP35951 Gm35558-203ENSMUST00000222264 204 ntBASIC4.55□□□□□ -1.68
LdlrP35951 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.55□□□□□ -1.68
LdlrP35951 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LdlrP35951 Gm23503-201ENSMUST00000083903 107 ntBASIC4.55□□□□□ -1.68
LdlrP35951 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LdlrP35951 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LdlrP35951 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
LdlrP35951 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.55□□□□□ -1.68
LdlrP35951 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.55□□□□□ -1.68
LdlrP35951 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LdlrP35951 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LdlrP35951 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
LdlrP35951 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.55□□□□□ -1.68
LdlrP35951 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.55□□□□□ -1.68
LdlrP35951 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LdlrP35951 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LdlrP35951 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
LdlrP35951 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LdlrP35951 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
LdlrP35951 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LdlrP35951 Gm25097-201ENSMUST00000104042 145 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LdlrP35951 Gm14304-201ENSMUST00000117272 446 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm12112-201ENSMUST00000117772 231 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm14881-201ENSMUST00000120366 372 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm13745-201ENSMUST00000121994 527 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm7846-201ENSMUST00000145844 274 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm16250-201ENSMUST00000148974 256 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm22819-201ENSMUST00000157445 303 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm25335-201ENSMUST00000158043 103 ntBASIC4.54□□□□□ -1.68
LdlrP35951 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.54□□□□□ -1.68
LdlrP35951 Gm29038-201ENSMUST00000191543 678 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC4.54□□□□□ -1.68
LdlrP35951 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.54□□□□□ -1.68
LdlrP35951 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Gm37836-201ENSMUST00000195875 175 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm17951-201ENSMUST00000198536 496 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm44409-201ENSMUST00000198810 166 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.54□□□□□ -1.68
LdlrP35951 Gm45048-201ENSMUST00000207058 429 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm4501-201ENSMUST00000207330 551 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm4558-201ENSMUST00000207886 521 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm4528-201ENSMUST00000207905 551 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm45498-201ENSMUST00000210346 283 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm7751-201ENSMUST00000212868 709 ntBASIC4.54□□□□□ -1.68
LdlrP35951 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.54□□□□□ -1.68
LdlrP35951 AC147240.1-201ENSMUST00000218767 431 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Gm8231-201ENSMUST00000221617 783 ntBASIC4.54□□□□□ -1.68
LdlrP35951 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
LdlrP35951 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LdlrP35951 Olfr881-201ENSMUST00000074611 948 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LdlrP35951 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LdlrP35951 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
LdlrP35951 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LdlrP35951 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.54□□□□□ -1.68
LdlrP35951 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.54□□□□□ -1.68
LdlrP35951 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LdlrP35951 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.53□□□□□ -1.68
LdlrP35951 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LdlrP35951 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LdlrP35951 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
LdlrP35951 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LdlrP35951 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LdlrP35951 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LdlrP35951 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LdlrP35951 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LdlrP35951 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.53□□□□□ -1.68
LdlrP35951 Gm13331-201ENSMUST00000117500 448 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms