Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm28768-201ENSMUST00000189034 378 ntBASIC3.43□□□□□ -1.86
Col2a1P28481 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.43□□□□□ -1.86
Col2a1P28481 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC3.43□□□□□ -1.86
Col2a1P28481 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Col2a1P28481 LOC667541-201ENSMUST00000223408 278 ntBASIC3.43□□□□□ -1.86
Col2a1P28481 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col2a1P28481 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col2a1P28481 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Col2a1P28481 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col2a1P28481 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Col2a1P28481 Gm44624-201ENSMUST00000208700 2278 ntBASIC3.43□□□□□ -1.86
Col2a1P28481 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.43□□□□□ -1.86
Col2a1P28481 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col2a1P28481 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col2a1P28481 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Col2a1P28481 Gm12787-201ENSMUST00000119234 396 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.42□□□□□ -1.86
Col2a1P28481 Gm18595-201ENSMUST00000175736 1068 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Col2a1P28481 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.42□□□□□ -1.86
Col2a1P28481 Gm28534-201ENSMUST00000187744 676 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Gm37111-201ENSMUST00000193250 634 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Gm18445-201ENSMUST00000195502 774 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Trdv3-201ENSMUST00000198551 309 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Gm42824-201ENSMUST00000199361 247 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Gm44399-201ENSMUST00000205043 226 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Gm44585-201ENSMUST00000207150 607 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 AC154851.2-201ENSMUST00000222172 644 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Col2a1P28481 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Col2a1P28481 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Col2a1P28481 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Col2a1P28481 Gm37703-201ENSMUST00000192292 1784 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.42□□□□□ -1.86
Col2a1P28481 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Col2a1P28481 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
Col2a1P28481 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Col2a1P28481 Gm14912-201ENSMUST00000120166 1773 ntBASIC3.42□□□□□ -1.86
Col2a1P28481 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col2a1P28481 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.41□□□□□ -1.86
Col2a1P28481 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col2a1P28481 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC3.41□□□□□ -1.86
Col2a1P28481 Mir3965-201ENSMUST00000175570 69 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm20656-201ENSMUST00000176925 518 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm24465-201ENSMUST00000178398 107 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC3.41□□□□□ -1.86
Col2a1P28481 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC3.41□□□□□ -1.86
Col2a1P28481 Gm28781-201ENSMUST00000185760 696 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm29574-201ENSMUST00000186226 696 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm28828-201ENSMUST00000186601 696 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm29307-201ENSMUST00000187367 696 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm20561-201ENSMUST00000188131 292 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm28896-201ENSMUST00000188609 696 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm29339-201ENSMUST00000189613 696 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm28159-201ENSMUST00000190296 696 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm29407-201ENSMUST00000191468 696 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col2a1P28481 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.41□□□□□ -1.86
Col2a1P28481 Gm38356-201ENSMUST00000194313 408 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm38107-201ENSMUST00000194873 696 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC3.41□□□□□ -1.86
Col2a1P28481 Gm44232-201ENSMUST00000204537 225 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm44688-201ENSMUST00000209083 537 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 AC123064.2-201ENSMUST00000217758 193 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col2a1P28481 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm26437-201ENSMUST00000082595 105 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Mir365-2-201ENSMUST00000083555 112 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
Col2a1P28481 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col2a1P28481 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col2a1P28481 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col2a1P28481 Gm13440-201ENSMUST00000121665 496 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col2a1P28481 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.41□□□□□ -1.86
Col2a1P28481 Gm25280-201ENSMUST00000157269 101 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Mir7068-201ENSMUST00000183439 74 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm28871-201ENSMUST00000186191 687 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm3489-201ENSMUST00000190083 528 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm38166-201ENSMUST00000191660 471 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm43601-201ENSMUST00000196294 945 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.41□□□□□ -1.86
Col2a1P28481 Gm44157-201ENSMUST00000204720 410 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm18043-201ENSMUST00000216741 739 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 AL645546.2-201ENSMUST00000224526 265 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 AC139294.2-201ENSMUST00000227159 285 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col2a1P28481 Gm23058-201ENSMUST00000093703 107 ntBASIC3.41□□□□□ -1.86
Col2a1P28481 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Col2a1P28481 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.4□□□□□ -1.86
Col2a1P28481 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Col2a1P28481 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.4□□□□□ -1.86
Col2a1P28481 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.4□□□□□ -1.86
Col2a1P28481 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
Col2a1P28481 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms