Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm11366-201ENSMUST00000119279 429 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Sdc1P18828 Gm9785-202ENSMUST00000144563 593 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm5958-201ENSMUST00000147698 297 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm23513-201ENSMUST00000158181 133 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm20674-201ENSMUST00000177452 369 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Sdc1P18828 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Sdc1P18828 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Sdc1P18828 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC2.87□□□□□ -1.95
Sdc1P18828 Mir7006-201ENSMUST00000183624 69 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm27568-201ENSMUST00000184220 99 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Sdc1P18828 Gm28148-201ENSMUST00000186924 697 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Sdc1P18828 Gm28976-201ENSMUST00000188070 144 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm18181-201ENSMUST00000190670 736 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC2.87□□□□□ -1.95
Sdc1P18828 Gm43524-201ENSMUST00000197278 298 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Mir6994-201ENSMUST00000198985 73 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm43967-201ENSMUST00000203787 301 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC2.87□□□□□ -1.95
Sdc1P18828 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Sdc1P18828 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC2.87□□□□□ -1.95
Sdc1P18828 AC154419.1-201ENSMUST00000227627 272 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Sdc1P18828 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Sdc1P18828 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Sdc1P18828 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Sdc1P18828 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Sdc1P18828 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Sdc1P18828 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Sdc1P18828 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.86□□□□□ -1.95
Sdc1P18828 Gm42547-201ENSMUST00000201159 3798 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Sdc1P18828 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Sdc1P18828 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Sdc1P18828 Mir1198-201ENSMUST00000116995 121 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm16089-201ENSMUST00000117679 336 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm15333-201ENSMUST00000118825 364 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm12881-201ENSMUST00000121191 203 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm13007-201ENSMUST00000121866 365 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm11403-201ENSMUST00000122195 369 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm16353-201ENSMUST00000159458 1223 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC2.86□□□□□ -1.95
Sdc1P18828 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC2.86□□□□□ -1.95
Sdc1P18828 Gm3370-201ENSMUST00000171785 500 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Sdc1P18828 Gm37698-201ENSMUST00000192605 463 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC2.86□□□□□ -1.95
Sdc1P18828 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.86□□□□□ -1.95
Sdc1P18828 Gm38076-201ENSMUST00000193889 450 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm43096-201ENSMUST00000196173 421 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm43489-201ENSMUST00000196810 993 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm17775-201ENSMUST00000198542 258 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm43142-201ENSMUST00000198670 361 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Sdc1P18828 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm18850-201ENSMUST00000211578 388 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm2607-201ENSMUST00000212389 627 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 AC161054.1-201ENSMUST00000214319 184 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 AC153852.1-201ENSMUST00000217881 567 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 AC133101.1-201ENSMUST00000226939 1199 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Sdc1P18828 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Sdc1P18828 Gm24928-201ENSMUST00000083399 107 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm25897-201ENSMUST00000083709 107 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Sdc1P18828 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Sdc1P18828 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Sdc1P18828 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
Sdc1P18828 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Sdc1P18828 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Sdc1P18828 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.86□□□□□ -1.95
Sdc1P18828 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Sdc1P18828 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Sdc1P18828 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.85□□□□□ -1.95
Sdc1P18828 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Sdc1P18828 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Sdc1P18828 Gm12900-201ENSMUST00000120919 573 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm23887-201ENSMUST00000122683 172 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm24244-201ENSMUST00000157317 130 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm23592-201ENSMUST00000157859 117 ntBASIC2.85□□□□□ -1.95
Sdc1P18828 Gm25369-201ENSMUST00000158848 132 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms