Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.02□□□□□ -1.93
Cdx1P18111 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.02□□□□□ -1.93
Cdx1P18111 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Cdx1P18111 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Cdx1P18111 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.02□□□□□ -1.93
Cdx1P18111 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Cdx1P18111 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Cdx1P18111 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Cdx1P18111 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Cdx1P18111 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Cdx1P18111 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Cdx1P18111 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Cdx1P18111 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Cdx1P18111 Gm14880-201ENSMUST00000117581 292 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm13831-201ENSMUST00000118764 302 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm9119-201ENSMUST00000118866 495 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm7219-201ENSMUST00000119619 297 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm13717-201ENSMUST00000119868 365 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm15799-201ENSMUST00000120899 289 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm22026-201ENSMUST00000122735 281 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.01□□□□□ -1.93
Cdx1P18111 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Cdx1P18111 Gm25883-201ENSMUST00000157781 271 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm4479-201ENSMUST00000178807 171 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm23816-201ENSMUST00000179617 132 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm28030-201ENSMUST00000184987 138 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.01□□□□□ -1.93
Cdx1P18111 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.01□□□□□ -1.93
Cdx1P18111 Gm19774-201ENSMUST00000190667 114 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Cdx1P18111 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.01□□□□□ -1.93
Cdx1P18111 Gm4248-201ENSMUST00000196905 316 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm44404-201ENSMUST00000203979 636 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm45588-201ENSMUST00000211213 630 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm18892-201ENSMUST00000217628 881 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Cdx1P18111 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Cdx1P18111 Gm25699-201ENSMUST00000082896 167 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.01□□□□□ -1.93
Cdx1P18111 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Cdx1P18111 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
Cdx1P18111 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Cdx1P18111 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Cdx1P18111 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Cdx1P18111 Gm37848-201ENSMUST00000195288 3103 ntBASIC3□□□□□ -1.93
Cdx1P18111 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Cdx1P18111 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Cdx1P18111 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3□□□□□ -1.93
Cdx1P18111 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Cdx1P18111 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3□□□□□ -1.93
Cdx1P18111 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm13379-201ENSMUST00000118053 621 ntBASIC3□□□□□ -1.93
Cdx1P18111 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm11429-201ENSMUST00000119089 144 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm12543-201ENSMUST00000120410 543 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm15387-201ENSMUST00000120421 648 ntBASIC3□□□□□ -1.93
Cdx1P18111 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm10357-201ENSMUST00000159886 264 ntBASIC3□□□□□ -1.93
Cdx1P18111 Snord92-201ENSMUST00000175548 85 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm22111-201ENSMUST00000178010 79 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm23687-201ENSMUST00000178664 79 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm24566-201ENSMUST00000179286 79 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm23305-201ENSMUST00000179342 79 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm26389-201ENSMUST00000179819 79 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm22130-201ENSMUST00000179979 79 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm22393-201ENSMUST00000180153 79 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm25085-201ENSMUST00000180298 79 ntBASIC3□□□□□ -1.93
Cdx1P18111 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3□□□□□ -1.93
Cdx1P18111 Gm27921-201ENSMUST00000183968 108 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm27190-201ENSMUST00000184890 542 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm28146-201ENSMUST00000185517 701 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm6947-201ENSMUST00000186254 78 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3□□□□□ -1.93
Cdx1P18111 Gm37098-201ENSMUST00000192290 244 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3□□□□□ -1.93
Cdx1P18111 Gm37164-201ENSMUST00000192809 637 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm17887-201ENSMUST00000200194 547 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3□□□□□ -1.93
Cdx1P18111 Gm44718-201ENSMUST00000206886 359 ntBASIC3□□□□□ -1.93
Cdx1P18111 AC102603.1-201ENSMUST00000227481 584 ntBASIC3□□□□□ -1.93
Cdx1P18111 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Cdx1P18111 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3□□□□□ -1.93
Cdx1P18111 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3□□□□□ -1.93
Cdx1P18111 Gm22970-201ENSMUST00000083304 186 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm5518-201ENSMUST00000084171 648 ntBASIC3□□□□□ -1.93
Cdx1P18111 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Cdx1P18111 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3□□□□□ -1.93
Cdx1P18111 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Cdx1P18111 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Cdx1P18111 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
Cdx1P18111 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Cdx1P18111 Gm38278-201ENSMUST00000194715 1365 ntBASIC3□□□□□ -1.93
Cdx1P18111 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms