Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col1a1P11087 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col1a1P11087 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col1a1P11087 Gm14142-201ENSMUST00000117833 296 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC3.36□□□□□ -1.87
Col1a1P11087 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.36□□□□□ -1.87
Col1a1P11087 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col1a1P11087 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.36□□□□□ -1.87
Col1a1P11087 Gm43601-201ENSMUST00000196294 945 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 Mir378a-201ENSMUST00000198300 66 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col1a1P11087 Gm44277-201ENSMUST00000205128 649 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.36□□□□□ -1.87
Col1a1P11087 Gm6562-201ENSMUST00000221903 464 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col1a1P11087 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col1a1P11087 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col1a1P11087 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.36□□□□□ -1.87
Col1a1P11087 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col1a1P11087 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col1a1P11087 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col1a1P11087 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC3.35□□□□□ -1.87
Col1a1P11087 Gm4468-201ENSMUST00000170206 294 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 Gm27315-201ENSMUST00000183977 154 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col1a1P11087 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.35□□□□□ -1.87
Col1a1P11087 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.35□□□□□ -1.87
Col1a1P11087 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 Gm45778-201ENSMUST00000211959 153 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 AC122301.1-201ENSMUST00000219625 507 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col1a1P11087 Gm26494-201ENSMUST00000083154 143 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 Gm24493-201ENSMUST00000083805 143 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col1a1P11087 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col1a1P11087 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.35□□□□□ -1.87
Col1a1P11087 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col1a1P11087 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Col1a1P11087 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col1a1P11087 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col1a1P11087 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.35□□□□□ -1.87
Col1a1P11087 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col1a1P11087 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.35□□□□□ -1.87
Col1a1P11087 Gm23803-201ENSMUST00000104610 132 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col1a1P11087 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col1a1P11087 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 Gm25866-201ENSMUST00000158245 112 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col1a1P11087 Gm7540-201ENSMUST00000219764 926 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 Gm7422-201ENSMUST00000220115 640 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC3.35□□□□□ -1.87
Col1a1P11087 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.35□□□□□ -1.87
Col1a1P11087 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.35□□□□□ -1.87
Col1a1P11087 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col1a1P11087 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.34□□□□□ -1.87
Col1a1P11087 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.34□□□□□ -1.87
Col1a1P11087 Mir682-201ENSMUST00000102281 96 ntBASIC3.34□□□□□ -1.88
Col1a1P11087 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.34□□□□□ -1.88
Col1a1P11087 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Col1a1P11087 Mir21a-201ENSMUST00000083521 92 ntBASIC3.34□□□□□ -1.88
Col1a1P11087 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Col1a1P11087 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.33□□□□□ -1.88
Col1a1P11087 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col1a1P11087 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col1a1P11087 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col1a1P11087 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col1a1P11087 Gm8569-201ENSMUST00000117630 647 ntBASIC3.33□□□□□ -1.88
Col1a1P11087 Gm22227-201ENSMUST00000157356 259 ntBASIC3.33□□□□□ -1.88
Col1a1P11087 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col1a1P11087 Gm8649-201ENSMUST00000181799 233 ntBASIC3.33□□□□□ -1.88
Col1a1P11087 Gm28614-201ENSMUST00000186483 458 ntBASIC3.33□□□□□ -1.88
Col1a1P11087 Gm45312-201ENSMUST00000210566 311 ntBASIC3.33□□□□□ -1.88
Col1a1P11087 Gm6842-201ENSMUST00000211361 390 ntBASIC3.33□□□□□ -1.88
Col1a1P11087 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col1a1P11087 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col1a1P11087 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.32□□□□□ -1.88
Col1a1P11087 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.32□□□□□ -1.88
Col1a1P11087 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col1a1P11087 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col1a1P11087 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col1a1P11087 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col1a1P11087 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col1a1P11087 Gm11905-201ENSMUST00000117653 678 ntBASIC3.32□□□□□ -1.88
Col1a1P11087 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC3.32□□□□□ -1.88
Col1a1P11087 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col1a1P11087 Gm24443-201ENSMUST00000157242 132 ntBASIC3.32□□□□□ -1.88
Col1a1P11087 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col1a1P11087 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col1a1P11087 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col1a1P11087 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms