Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm45778-201ENSMUST00000211959 153 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.63□□□□□ -1.83
Chmp6P0C0A3 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm5176-202ENSMUST00000220267 583 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm18388-201ENSMUST00000222339 557 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 LOC667541-201ENSMUST00000223408 278 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm5265-201ENSMUST00000076828 342 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm23975-201ENSMUST00000082685 106 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm22304-201ENSMUST00000082688 129 ntBASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.63□□□□□ -1.83
Chmp6P0C0A3 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm13692-201ENSMUST00000120774 371 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm14577-201ENSMUST00000121134 256 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm22036-201ENSMUST00000157279 215 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm24314-201ENSMUST00000158274 123 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Mir6413-201ENSMUST00000184049 108 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm28591-201ENSMUST00000185259 183 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm44084-201ENSMUST00000203947 409 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm6064-201ENSMUST00000203999 454 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm19232-201ENSMUST00000211621 652 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Gm8785-201ENSMUST00000220259 487 ntBASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Chmp6P0C0A3 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm12125-201ENSMUST00000117261 736 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm12568-201ENSMUST00000117362 624 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm14681-201ENSMUST00000118047 411 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm11433-201ENSMUST00000118318 228 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm6071-201ENSMUST00000119561 440 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm20773-201ENSMUST00000178940 681 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm28141-201ENSMUST00000186676 342 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm9379-201ENSMUST00000196790 646 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm26121-201ENSMUST00000083364 162 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Mir325-201ENSMUST00000083491 98 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.61□□□□□ -1.83
Chmp6P0C0A3 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm25097-201ENSMUST00000104042 145 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm13359-201ENSMUST00000119000 695 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm11896-201ENSMUST00000121105 820 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm26254-201ENSMUST00000122491 118 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm22792-201ENSMUST00000157225 133 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm23667-201ENSMUST00000157466 120 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Gm23671-201ENSMUST00000157472 103 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Chmp6P0C0A3 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms