Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 AC105169.1-201ENSMUST00000218912 1294 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.8□□□□□ -1.96
Col5a1O88207 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC2.8□□□□□ -1.96
Col5a1O88207 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 Gm22005-201ENSMUST00000082795 141 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 Gm26121-201ENSMUST00000083364 162 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Col5a1O88207 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Col5a1O88207 Gm8074-201ENSMUST00000095071 252 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col5a1O88207 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col5a1O88207 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 Gm45223-201ENSMUST00000207037 5138 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 Gm37652-201ENSMUST00000195290 2095 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col5a1O88207 Mir290a-201ENSMUST00000104627 83 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Mir466k-201ENSMUST00000116774 122 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm24274-201ENSMUST00000116787 124 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm14791-201ENSMUST00000119061 1166 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm16471-201ENSMUST00000121940 618 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm24382-201ENSMUST00000122698 107 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm23116-201ENSMUST00000158481 67 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm22116-201ENSMUST00000158791 141 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col5a1O88207 Gm16318-201ENSMUST00000162402 601 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm26933-201ENSMUST00000182320 827 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC2.79□□□□□ -1.96
Col5a1O88207 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Ighv8-1-201ENSMUST00000194897 291 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm43368-201ENSMUST00000200638 409 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.79□□□□□ -1.96
Col5a1O88207 AC152946.2-201ENSMUST00000219071 337 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col5a1O88207 BC055308-201ENSMUST00000193380 2538 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC2.79□□□□□ -1.96
Col5a1O88207 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col5a1O88207 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Col5a1O88207 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm23230-201ENSMUST00000157298 133 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Col5a1O88207 Gm27315-201ENSMUST00000183977 154 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm28149-201ENSMUST00000187102 378 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm28768-201ENSMUST00000189034 378 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm28745-201ENSMUST00000190069 305 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm29038-201ENSMUST00000191543 678 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.79□□□□□ -1.96
Col5a1O88207 Gm44548-201ENSMUST00000208929 192 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Col5a1O88207 Gm18899-201ENSMUST00000217663 546 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC2.79□□□□□ -1.96
Col5a1O88207 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col5a1O88207 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col5a1O88207 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Col5a1O88207 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
Col5a1O88207 AC151831.1-201ENSMUST00000227609 4033 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Col5a1O88207 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.79□□□□□ -1.96
Col5a1O88207 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col5a1O88207 Gm8995-201ENSMUST00000184842 7280 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC2.78□□□□□ -1.96
Col5a1O88207 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col5a1O88207 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col5a1O88207 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col5a1O88207 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Col5a1O88207 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.78□□□□□ -1.96
Col5a1O88207 Trbv10-201ENSMUST00000168322 289 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Mir5123-201ENSMUST00000177794 83 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Gm19791-201ENSMUST00000180398 859 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Gm26928-201ENSMUST00000182674 572 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC2.78□□□□□ -1.96
Col5a1O88207 Gm18984-201ENSMUST00000193998 1124 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Gm37676-201ENSMUST00000195496 507 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Gm19418-201ENSMUST00000197436 580 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Gm18748-201ENSMUST00000198507 622 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC2.78□□□□□ -1.96
Col5a1O88207 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC2.78□□□□□ -1.96
Col5a1O88207 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col5a1O88207 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Col5a1O88207 Gm28634-201ENSMUST00000191087 2613 ntBASIC2.78□□□□□ -1.97
Col5a1O88207 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.78□□□□□ -1.97
Col5a1O88207 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Col5a1O88207 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col5a1O88207 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col5a1O88207 Mir291a-201ENSMUST00000104815 82 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.77□□□□□ -1.97
Col5a1O88207 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.77□□□□□ -1.97
Col5a1O88207 Gm23957-201ENSMUST00000157209 90 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm25280-201ENSMUST00000157269 101 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm26187-201ENSMUST00000157693 101 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm20162-201ENSMUST00000193629 871 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm17967-201ENSMUST00000195319 647 ntBASIC2.77□□□□□ -1.97
Col5a1O88207 Gm19620-201ENSMUST00000195972 434 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms