Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm26067-201ENSMUST00000103789 110 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm11577-201ENSMUST00000118030 737 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm7657-201ENSMUST00000118851 666 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm14566-201ENSMUST00000118915 321 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm13717-201ENSMUST00000119868 365 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm5401-201ENSMUST00000122444 365 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm24441-201ENSMUST00000157235 281 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm23993-201ENSMUST00000157478 144 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm22383-201ENSMUST00000158188 327 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm24940-201ENSMUST00000158326 108 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm24860-201ENSMUST00000158457 276 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm17148-201ENSMUST00000164702 249 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm26430-201ENSMUST00000178054 107 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm22621-201ENSMUST00000179678 74 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm26180-201ENSMUST00000179942 107 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm28257-201ENSMUST00000185244 463 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm29668-201ENSMUST00000187802 315 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm37961-201ENSMUST00000192729 299 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm37817-201ENSMUST00000195276 434 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm43144-201ENSMUST00000198256 485 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 AC159308.1-201ENSMUST00000216615 1351 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.51□□□□□ -1.69
Pcdh1F7BJK1 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm7164-201ENSMUST00000117503 450 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm14469-201ENSMUST00000118363 202 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm12235-201ENSMUST00000118596 170 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm12871-201ENSMUST00000118758 438 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Mup-ps28-201ENSMUST00000120686 289 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm15428-201ENSMUST00000121352 333 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm22958-201ENSMUST00000122512 184 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm23078-201ENSMUST00000157848 148 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm26172-201ENSMUST00000158421 134 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm24100-201ENSMUST00000178592 79 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm24137-201ENSMUST00000180055 79 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm22391-201ENSMUST00000180356 79 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm27849-201ENSMUST00000183673 125 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Mir6417-201ENSMUST00000183815 116 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm9443-201ENSMUST00000188406 816 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm36891-201ENSMUST00000191995 655 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm42621-201ENSMUST00000198114 275 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm42990-201ENSMUST00000199231 312 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm44609-201ENSMUST00000207157 460 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Gm5045-201ENSMUST00000027054 810 ntBASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Pcdh1F7BJK1 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms