Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Gm12586-201ENSMUST00000117328 1316 ntBASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Gm6444-201ENSMUST00000119611 458 ntBASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Gm14506-201ENSMUST00000121165 536 ntBASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Gm45296-201ENSMUST00000209625 205 ntBASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
Col6a3E9PWQ3 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
Col6a3E9PWQ3 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
Col6a3E9PWQ3 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
Col6a3E9PWQ3 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
Col6a3E9PWQ3 Gm15021-201ENSMUST00000117832 742 ntBASIC2.84□□□□□ -1.95
Col6a3E9PWQ3 Gm43587-201ENSMUST00000199590 204 ntBASIC2.84□□□□□ -1.95
Col6a3E9PWQ3 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Col6a3E9PWQ3 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Col6a3E9PWQ3 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Col6a3E9PWQ3 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Col6a3E9PWQ3 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Col6a3E9PWQ3 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC2.84□□□□□ -1.96
Col6a3E9PWQ3 Gm23889-201ENSMUST00000122689 104 ntBASIC2.84□□□□□ -1.96
Col6a3E9PWQ3 Gm22532-201ENSMUST00000158822 140 ntBASIC2.84□□□□□ -1.96
Col6a3E9PWQ3 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
Col6a3E9PWQ3 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC2.84□□□□□ -1.96
Col6a3E9PWQ3 Gm43901-201ENSMUST00000203247 453 ntBASIC2.84□□□□□ -1.96
Col6a3E9PWQ3 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.84□□□□□ -1.96
Col6a3E9PWQ3 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Col6a3E9PWQ3 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.96
Col6a3E9PWQ3 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC2.84□□□□□ -1.96
Col6a3E9PWQ3 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm6574-201ENSMUST00000120037 362 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm11866-201ENSMUST00000120209 335 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm25456-201ENSMUST00000157952 109 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm24638-201ENSMUST00000179807 132 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Mir8096-201ENSMUST00000184526 127 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm7117-201ENSMUST00000071515 387 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm24446-201ENSMUST00000083982 156 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm44682-201ENSMUST00000208501 2614 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm13100-201ENSMUST00000117157 1439 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm25094-201ENSMUST00000103992 131 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm13314-201ENSMUST00000118742 335 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm23592-201ENSMUST00000157859 117 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm44525-201ENSMUST00000183129 2634 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm38248-201ENSMUST00000193744 5783 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm22713-201ENSMUST00000116895 130 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.83□□□□□ -1.96
Col6a3E9PWQ3 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Gm14823-201ENSMUST00000117698 238 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Gm18453-201ENSMUST00000208000 626 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Gm19154-201ENSMUST00000223330 940 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 AC135119.1-201ENSMUST00000227935 3717 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Gm43319-201ENSMUST00000198036 2270 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Gm24715-201ENSMUST00000102377 95 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Gm25500-201ENSMUST00000104426 123 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Gm24380-201ENSMUST00000122696 324 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Gm22556-201ENSMUST00000157803 100 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Gm37652-201ENSMUST00000195290 2095 ntBASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Col6a3E9PWQ3 Gm15377-201ENSMUST00000119594 246 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm44161-201ENSMUST00000203532 253 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm11221-201ENSMUST00000117230 597 ntBASIC2.81□□□□□ -1.96
Col6a3E9PWQ3 Gm29657-201ENSMUST00000189807 342 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms