Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Pcdhgb8A0A140LI48 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Pcdhgb8A0A140LI48 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.37□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.37□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.37□□□□□ -1.87
Pcdhgb8A0A140LI48 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Mir667-201ENSMUST00000102441 92 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm26075-201ENSMUST00000104062 121 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm23133-201ENSMUST00000104255 135 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm24792-201ENSMUST00000104286 128 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm14627-201ENSMUST00000118931 567 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Defa-ps1-201ENSMUST00000119062 282 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm11830-201ENSMUST00000120175 561 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm23540-201ENSMUST00000157543 164 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm17655-201ENSMUST00000167969 255 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm22120-201ENSMUST00000175590 70 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm22776-201ENSMUST00000178634 94 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm23767-201ENSMUST00000179278 94 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm27522-201ENSMUST00000183949 230 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm19774-201ENSMUST00000190667 114 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm19030-201ENSMUST00000194947 552 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm4248-201ENSMUST00000196905 316 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm18944-201ENSMUST00000207672 643 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm45162-201ENSMUST00000209013 618 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm6842-201ENSMUST00000211361 390 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm19233-201ENSMUST00000219772 936 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm3565-201ENSMUST00000222670 609 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdhgb8A0A140LI48 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm14677-201ENSMUST00000117866 486 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm11393-201ENSMUST00000118019 288 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm15231-201ENSMUST00000119174 447 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm26148-201ENSMUST00000157430 68 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm23123-201ENSMUST00000157648 144 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm24727-201ENSMUST00000158231 144 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm4761-201ENSMUST00000178086 582 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm10067-201ENSMUST00000179462 348 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm17781-201ENSMUST00000195232 649 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm45965-201ENSMUST00000221192 1284 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Mir370-201ENSMUST00000083499 79 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Pcdhgb8A0A140LI48 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Pcdhgb8A0A140LI48 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Pcdhgb8A0A140LI48 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.34□□□□□ -1.87
Pcdhgb8A0A140LI48 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms