Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm37617-201ENSMUST00000194309 159 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm29704-201ENSMUST00000196011 253 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm43214-201ENSMUST00000199242 352 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm44611-201ENSMUST00000207507 355 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm6841-201ENSMUST00000220602 598 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 AC154419.1-201ENSMUST00000227627 272 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 AC130547.1-201ENSMUST00000228079 1047 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 CT485608.1-201ENSMUST00000228759 389 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm23447-201ENSMUST00000082798 163 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Olfr203-201ENSMUST00000089305 924 ntBASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trbv5A0A0B4J1G9 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Mir592-201ENSMUST00000102113 96 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Igkv11-106-201ENSMUST00000103331 346 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm24125-201ENSMUST00000104105 137 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm22019-201ENSMUST00000104359 96 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm13058-201ENSMUST00000117097 1435 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm5754-201ENSMUST00000118774 892 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm11876-201ENSMUST00000120002 269 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm11344-201ENSMUST00000122011 335 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm25105-201ENSMUST00000122477 130 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm24213-201ENSMUST00000158255 258 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm27155-201ENSMUST00000183716 898 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm29064-201ENSMUST00000187014 813 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm28534-201ENSMUST00000187744 676 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 AC122901.2-201ENSMUST00000216926 285 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 AC154358.1-201ENSMUST00000224871 218 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 AC154730.1-201ENSMUST00000227874 816 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 AC074315.1-201ENSMUST00000228801 214 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Snord35b-201ENSMUST00000082833 87 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm25480-201ENSMUST00000083217 133 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Mir325-201ENSMUST00000083491 98 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm23846-201ENSMUST00000083835 107 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trbv5A0A0B4J1G9 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Gm26418-201ENSMUST00000104275 137 ntBASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Gm12691-201ENSMUST00000120186 456 ntBASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Gm11446-201ENSMUST00000121319 866 ntBASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Gm22840-201ENSMUST00000158444 136 ntBASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Gm27477-201ENSMUST00000184649 143 ntBASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.54□□□□□ -2
Trbv5A0A0B4J1G9 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms