Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm15613-201ENSMUST00000118396 326 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm14577-201ENSMUST00000121134 256 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm12372-201ENSMUST00000121654 768 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm25292-201ENSMUST00000122797 322 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm4207-201ENSMUST00000173144 960 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm25817-201ENSMUST00000177758 121 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm24766-201ENSMUST00000179182 121 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm37603-201ENSMUST00000192368 219 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm37239-201ENSMUST00000193510 141 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm42516-201ENSMUST00000198691 767 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm9375-201ENSMUST00000208899 903 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm24626-201ENSMUST00000082621 161 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.44□□□□□ -1.86
Trim3Q9R1R2 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm25833-201ENSMUST00000104137 133 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm6584-201ENSMUST00000119671 447 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Mup-ps1-201ENSMUST00000120720 544 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm11896-201ENSMUST00000121105 820 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm22480-201ENSMUST00000122568 128 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm37343-201ENSMUST00000192542 111 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm42926-201ENSMUST00000200496 697 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm5322-201ENSMUST00000206142 699 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm6112-201ENSMUST00000208037 629 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm46234-201ENSMUST00000218702 259 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Trim3Q9R1R2 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.42□□□□□ -1.86
Trim3Q9R1R2 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Trim3Q9R1R2 Gm24273-201ENSMUST00000102332 164 ntBASIC3.42□□□□□ -1.86
Trim3Q9R1R2 Gm15268-201ENSMUST00000118845 352 ntBASIC3.42□□□□□ -1.86
Trim3Q9R1R2 Gm14534-201ENSMUST00000120045 357 ntBASIC3.42□□□□□ -1.86
Trim3Q9R1R2 Gm15193-201ENSMUST00000120224 865 ntBASIC3.42□□□□□ -1.86
Trim3Q9R1R2 Gm15116-201ENSMUST00000122248 663 ntBASIC3.42□□□□□ -1.86
Trim3Q9R1R2 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms