Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm19498-201ENSMUST00000191128 331 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm37692-201ENSMUST00000192633 232 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Ighv2-8-201ENSMUST00000193935 262 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm28724-202ENSMUST00000194218 295 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm6543-201ENSMUST00000197353 808 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Gm10222-201ENSMUST00000088336 294 ntBASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Prpf40aQ9R1C7 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm23941-201ENSMUST00000101953 107 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm14868-201ENSMUST00000117840 216 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm2066-201ENSMUST00000118046 389 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm14220-201ENSMUST00000118114 449 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm14753-201ENSMUST00000118503 246 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm22849-201ENSMUST00000157713 307 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm24395-201ENSMUST00000158139 125 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm26172-201ENSMUST00000158421 134 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm19637-201ENSMUST00000185933 579 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm28943-201ENSMUST00000186187 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm28736-201ENSMUST00000186257 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm29401-201ENSMUST00000186690 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm29178-204ENSMUST00000186784 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm28589-201ENSMUST00000186991 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm28936-201ENSMUST00000187153 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm29121-201ENSMUST00000187611 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm28243-201ENSMUST00000187801 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm28844-202ENSMUST00000187977 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm29058-201ENSMUST00000189510 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm29624-201ENSMUST00000190018 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm28780-201ENSMUST00000190223 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm28969-211ENSMUST00000190992 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm28990-207ENSMUST00000191219 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm36468-201ENSMUST00000192119 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm31572-201ENSMUST00000193341 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm30175-201ENSMUST00000194173 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm30858-201ENSMUST00000195516 615 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm35876-201ENSMUST00000205044 459 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm45032-201ENSMUST00000205375 520 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.87□□□□□ -1.47
Prpf40aQ9R1C7 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm43736-201ENSMUST00000196377 2281 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Snord98-201ENSMUST00000116819 65 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm13250-201ENSMUST00000117209 753 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm13664-201ENSMUST00000117304 345 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm11576-201ENSMUST00000117433 417 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm11822-201ENSMUST00000119177 415 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm23537-201ENSMUST00000157536 330 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms