Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm26148-201ENSMUST00000157430 68 ntBASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm6486-201ENSMUST00000166202 434 ntBASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm25874-201ENSMUST00000178030 79 ntBASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm10067-201ENSMUST00000179462 348 ntBASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm29408-201ENSMUST00000187536 216 ntBASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm44092-201ENSMUST00000204470 258 ntBASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.38□□□□□ -1.71
Trim54Q9ERP3 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm18557-201ENSMUST00000218710 433 ntBASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.38□□□□□ -1.71
Trim54Q9ERP3 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm24608-201ENSMUST00000104381 136 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm15108-201ENSMUST00000116160 803 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm26276-201ENSMUST00000157099 109 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm22889-201ENSMUST00000158639 58 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm5731-201ENSMUST00000190969 481 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm37791-201ENSMUST00000195081 286 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm4644-201ENSMUST00000197587 400 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm17887-201ENSMUST00000200194 547 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm43440-201ENSMUST00000201957 729 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm18602-201ENSMUST00000209794 851 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm45742-201ENSMUST00000212400 433 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 AC239878.1-201ENSMUST00000224212 506 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm25481-201ENSMUST00000083221 158 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Mir370-201ENSMUST00000083499 79 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.37□□□□□ -1.71
Trim54Q9ERP3 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm24581-201ENSMUST00000103962 133 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm14579-201ENSMUST00000117068 283 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm15195-201ENSMUST00000118775 263 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm14586-201ENSMUST00000119571 408 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm11718-201ENSMUST00000119942 537 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm12044-201ENSMUST00000120335 213 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm11692-201ENSMUST00000122121 902 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm11403-201ENSMUST00000122195 369 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm13092-201ENSMUST00000136346 260 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm5552-201ENSMUST00000197149 515 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm19418-201ENSMUST00000197436 580 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm5983-201ENSMUST00000197739 770 ntBASIC4.36□□□□□ -1.71
Trim54Q9ERP3 Gm19366-201ENSMUST00000206996 156 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms