Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm24273-201ENSMUST00000102332 164 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm3160-201ENSMUST00000128343 607 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm22277-201ENSMUST00000157204 277 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm24505-201ENSMUST00000157682 126 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm26371-201ENSMUST00000157829 104 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm25971-201ENSMUST00000158953 286 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm17117-201ENSMUST00000163665 299 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm17075-201ENSMUST00000171924 670 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm22910-201ENSMUST00000178568 132 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm6501-201ENSMUST00000187178 916 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm5731-201ENSMUST00000190969 481 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm17966-201ENSMUST00000193453 594 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm42621-201ENSMUST00000198114 275 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm8249-201ENSMUST00000219225 465 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm2710-201ENSMUST00000073196 603 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.17□□□□□ -1.9
Lima1Q9ERG0 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm5392-201ENSMUST00000122189 789 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Mir3473a-201ENSMUST00000175011 78 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Mir6413-201ENSMUST00000184049 108 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Trbv27-201ENSMUST00000193711 277 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm29815-201ENSMUST00000202418 178 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm6991-201ENSMUST00000218475 1178 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm7540-201ENSMUST00000219764 926 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm4263-202ENSMUST00000221392 667 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm25592-201ENSMUST00000082635 131 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm22739-201ENSMUST00000083437 160 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Lima1Q9ERG0 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Lima1Q9ERG0 Gm24541-201ENSMUST00000103871 96 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm13873-201ENSMUST00000119208 427 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm28146-201ENSMUST00000185517 701 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm29064-201ENSMUST00000187014 813 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm28923-201ENSMUST00000187755 322 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm28060-201ENSMUST00000191554 189 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm37219-201ENSMUST00000192036 926 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm20162-201ENSMUST00000193629 871 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm36943-201ENSMUST00000194422 282 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm43239-201ENSMUST00000200131 201 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 AC073947.1-201ENSMUST00000216991 649 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm19786-201ENSMUST00000222589 580 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm7204-201ENSMUST00000062591 600 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm26121-201ENSMUST00000083364 162 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Lima1Q9ERG0 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms