Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ddx28Q9CWT6 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.74□□□□□ -1.81
Ddx28Q9CWT6 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ddx28Q9CWT6 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ddx28Q9CWT6 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ddx28Q9CWT6 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm22493-201ENSMUST00000104494 132 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm12568-201ENSMUST00000117362 624 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm7429-201ENSMUST00000118664 348 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm14901-201ENSMUST00000119001 283 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm6797-201ENSMUST00000119440 512 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm14119-201ENSMUST00000119511 235 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Snrpert-201ENSMUST00000121967 279 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm6969-201ENSMUST00000140065 342 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm16558-201ENSMUST00000163015 532 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm19898-201ENSMUST00000177490 251 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm27233-201ENSMUST00000184030 307 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm29259-201ENSMUST00000186396 694 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm43855-201ENSMUST00000197462 507 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm44371-201ENSMUST00000204148 467 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm44135-201ENSMUST00000205221 368 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 CT009765.2-201ENSMUST00000221331 392 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm19786-201ENSMUST00000222589 580 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.73□□□□□ -1.81
Ddx28Q9CWT6 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Snord66-201ENSMUST00000104051 75 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm14816-201ENSMUST00000117174 294 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm13155-201ENSMUST00000119277 646 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm8178-201ENSMUST00000121570 646 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm17177-201ENSMUST00000169144 483 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm19807-201ENSMUST00000173971 667 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm5473-201ENSMUST00000179326 642 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Mir6414-201ENSMUST00000183685 82 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Mir7074-201ENSMUST00000183884 63 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Mir6537-201ENSMUST00000184150 110 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm37866-201ENSMUST00000191950 696 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm37946-201ENSMUST00000192064 347 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm44092-201ENSMUST00000204470 258 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm29817-201ENSMUST00000210098 172 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm7786-201ENSMUST00000210494 436 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Gm23939-201ENSMUST00000082880 133 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Olfr203-201ENSMUST00000089305 924 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ddx28Q9CWT6 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 122.8 ms