Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 mt-Tr-201ENSMUST00000082412 68 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm23097-201ENSMUST00000083448 105 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 AC154511.1-201ENSMUST00000222578 1587 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm13349-201ENSMUST00000118436 411 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm15113-201ENSMUST00000119280 836 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm2318-201ENSMUST00000119623 639 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm2768-201ENSMUST00000121062 250 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm12340-201ENSMUST00000121617 462 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm11506-201ENSMUST00000122414 470 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm22208-201ENSMUST00000122658 110 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm10059-201ENSMUST00000131139 171 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm22076-201ENSMUST00000158601 84 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm7398-201ENSMUST00000178589 639 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm7375-201ENSMUST00000179232 639 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm3681-201ENSMUST00000179940 639 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm25873-201ENSMUST00000180317 107 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Mir6341-201ENSMUST00000183490 121 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm5983-201ENSMUST00000197739 770 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm17956-201ENSMUST00000199931 838 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm7786-201ENSMUST00000210494 436 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm7495-201ENSMUST00000215099 426 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 AC116589.1-201ENSMUST00000220634 327 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 AC159619.2-201ENSMUST00000222924 401 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Ushbp1Q8R370 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.96□□□□□ -1.61
Ushbp1Q8R370 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Ushbp1Q8R370 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Ushbp1Q8R370 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.96□□□□□ -1.61
Ushbp1Q8R370 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.61
Ushbp1Q8R370 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Mir105-201ENSMUST00000104655 80 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Mup-ps22-201ENSMUST00000121611 243 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm12368-201ENSMUST00000122251 434 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm18522-201ENSMUST00000173947 650 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Mir3058-201ENSMUST00000175126 91 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm28118-201ENSMUST00000185957 294 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm28625-201ENSMUST00000188309 205 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm19694-201ENSMUST00000192364 505 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm43304-201ENSMUST00000196803 326 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm43007-201ENSMUST00000197618 291 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm45146-201ENSMUST00000207108 221 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm44754-201ENSMUST00000208155 400 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm18113-201ENSMUST00000220630 303 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm9762-201ENSMUST00000036976 444 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Ushbp1Q8R370 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Ushbp1Q8R370 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms