Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm15854-201ENSMUST00000118879 808 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm12723-201ENSMUST00000120700 451 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm13973-201ENSMUST00000121371 894 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm23505-201ENSMUST00000158989 130 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm21139-201ENSMUST00000186594 877 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm28923-201ENSMUST00000187755 322 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm28069-201ENSMUST00000189926 214 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm37431-201ENSMUST00000195102 111 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm5322-201ENSMUST00000206142 699 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc28aQ8CEI3 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm13076-201ENSMUST00000118041 204 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm12230-201ENSMUST00000118301 454 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm7363-201ENSMUST00000119883 399 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm5384-201ENSMUST00000120313 463 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm22345-201ENSMUST00000122644 107 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Mir6943-201ENSMUST00000185186 66 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm43746-201ENSMUST00000200028 317 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm43198-201ENSMUST00000200927 326 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm20074-201ENSMUST00000208144 484 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm24917-201ENSMUST00000083935 104 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Ube2nl-201ENSMUST00000085228 456 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.18□□□□□ -1.9
Ccdc28aQ8CEI3 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm25817-201ENSMUST00000177758 121 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm24766-201ENSMUST00000179182 121 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm26585-201ENSMUST00000180890 630 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Mir6393-201ENSMUST00000183709 94 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Mir6899-201ENSMUST00000184798 64 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm1833-201ENSMUST00000191608 682 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm19418-201ENSMUST00000197436 580 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm44157-201ENSMUST00000204720 410 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm19126-201ENSMUST00000207896 509 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm45474-201ENSMUST00000209471 408 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm18193-201ENSMUST00000210017 772 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm8274-201ENSMUST00000219820 463 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Mir184-201ENSMUST00000083662 69 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.17□□□□□ -1.9
Ccdc28aQ8CEI3 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Gm15951-201ENSMUST00000118377 400 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Gm26277-201ENSMUST00000157097 152 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Mir6933-201ENSMUST00000184982 81 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Gm36943-201ENSMUST00000194422 282 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Gm7726-201ENSMUST00000206241 231 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Gm7786-201ENSMUST00000210494 436 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Gm18225-201ENSMUST00000216708 742 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Gm6841-201ENSMUST00000220602 598 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Gm26121-201ENSMUST00000083364 162 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Mir21a-201ENSMUST00000083521 92 ntBASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc28aQ8CEI3 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
Ccdc28aQ8CEI3 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.15□□□□□ -1.9
Ccdc28aQ8CEI3 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Ccdc28aQ8CEI3 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.15□□□□□ -1.9
Ccdc28aQ8CEI3 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm24541-201ENSMUST00000103871 96 ntBASIC3.15□□□□□ -1.91
Ccdc28aQ8CEI3 Gm25295-201ENSMUST00000122794 306 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms