Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Vps53Q8CCB4 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Vps53Q8CCB4 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.91□□□□□ -1.62
Vps53Q8CCB4 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Vps53Q8CCB4 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Vps53Q8CCB4 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Vps53Q8CCB4 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Vps53Q8CCB4 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
Vps53Q8CCB4 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Vps53Q8CCB4 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.9□□□□□ -1.62
Vps53Q8CCB4 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
Vps53Q8CCB4 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.9□□□□□ -1.62
Vps53Q8CCB4 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Vps53Q8CCB4 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.9□□□□□ -1.62
Vps53Q8CCB4 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Vps53Q8CCB4 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm7974-201ENSMUST00000117154 408 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm14901-201ENSMUST00000119001 283 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm11448-201ENSMUST00000120427 450 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm10444-201ENSMUST00000126708 148 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm22733-201ENSMUST00000158094 91 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm17054-201ENSMUST00000169811 259 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm29320-201ENSMUST00000185235 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm28471-201ENSMUST00000185994 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm29179-202ENSMUST00000186138 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm28598-201ENSMUST00000186490 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm29448-201ENSMUST00000186675 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm29314-201ENSMUST00000186800 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm28253-202ENSMUST00000187971 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm29268-201ENSMUST00000188669 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm29169-201ENSMUST00000189835 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm29218-205ENSMUST00000190846 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm28978-201ENSMUST00000191120 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Trbv22-201ENSMUST00000191697 291 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm37172-201ENSMUST00000191926 615 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm42805-201ENSMUST00000196158 276 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm43405-201ENSMUST00000198642 337 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Snord21-201ENSMUST00000082519 94 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm22423-201ENSMUST00000082861 184 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
Vps53Q8CCB4 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm10552-201ENSMUST00000113396 372 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm11876-201ENSMUST00000120002 269 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm11398-201ENSMUST00000120330 320 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm16411-201ENSMUST00000122164 1100 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm23781-201ENSMUST00000157940 308 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm3030-201ENSMUST00000163410 516 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm9593-201ENSMUST00000166034 469 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm18396-201ENSMUST00000177095 361 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm2092-201ENSMUST00000178887 639 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm2759-201ENSMUST00000179938 639 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm44909-201ENSMUST00000208756 165 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 AC157017.1-201ENSMUST00000220148 364 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Gm3565-201ENSMUST00000222670 609 ntBASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.89□□□□□ -1.63
Vps53Q8CCB4 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms