Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm23407-201ENSMUST00000082538 91 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Gm43844-201ENSMUST00000202926 5605 ntBASIC5.88□□□□□ -1.47
Usp40Q8BWR4 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Usp40Q8BWR4 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm11252-201ENSMUST00000120572 939 ntBASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm22073-201ENSMUST00000122668 189 ntBASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm24910-201ENSMUST00000157289 272 ntBASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm24961-201ENSMUST00000157918 184 ntBASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm27999-201ENSMUST00000183539 193 ntBASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm18306-201ENSMUST00000207338 569 ntBASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Usp40Q8BWR4 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm11408-201ENSMUST00000117889 519 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm13349-201ENSMUST00000118436 411 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm15014-201ENSMUST00000120742 258 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm9003-201ENSMUST00000121810 482 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm4487-201ENSMUST00000150617 442 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm24503-201ENSMUST00000158454 135 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Mir5710-201ENSMUST00000176884 69 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm22367-201ENSMUST00000178930 132 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm29148-201ENSMUST00000188140 336 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm18698-201ENSMUST00000192327 668 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm38053-201ENSMUST00000193938 160 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm45232-201ENSMUST00000207811 162 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm25141-201ENSMUST00000083177 107 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Mir412-201ENSMUST00000083636 80 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.86□□□□□ -1.47
Usp40Q8BWR4 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm44625-201ENSMUST00000207838 1561 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Mir804-201ENSMUST00000103251 95 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm12427-201ENSMUST00000117719 302 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm15025-201ENSMUST00000118434 418 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm14930-201ENSMUST00000118864 652 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm23032-201ENSMUST00000157995 107 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm22314-201ENSMUST00000158007 281 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm24729-201ENSMUST00000158225 137 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm23816-201ENSMUST00000179617 132 ntBASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC5.85□□□□□ -1.47
Usp40Q8BWR4 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms