Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm26746-201ENSMUST00000181722 487 ntBASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Gm28724-202ENSMUST00000194218 295 ntBASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Gm29817-201ENSMUST00000210098 172 ntBASIC4.82□□□□□ -1.64
Ddx58Q6Q899 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.82□□□□□ -1.64
Ddx58Q6Q899 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.82□□□□□ -1.64
Ddx58Q6Q899 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.82□□□□□ -1.64
Ddx58Q6Q899 AC125464.1-201ENSMUST00000228013 512 ntBASIC4.82□□□□□ -1.64
Ddx58Q6Q899 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Gm22423-201ENSMUST00000082861 184 ntBASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ddx58Q6Q899 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm24581-201ENSMUST00000103962 133 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm13731-201ENSMUST00000117332 196 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm15783-201ENSMUST00000117521 633 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm15613-201ENSMUST00000118396 326 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm15268-201ENSMUST00000118845 352 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm14586-201ENSMUST00000119571 408 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm16458-201ENSMUST00000121428 502 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm22480-201ENSMUST00000122568 128 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm14651-201ENSMUST00000147192 442 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm22059-201ENSMUST00000157544 104 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm27760-201ENSMUST00000185048 114 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm29259-201ENSMUST00000186396 694 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm20811-201ENSMUST00000190500 553 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm37603-201ENSMUST00000192368 219 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm43405-201ENSMUST00000198642 337 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 AC116589.9-201ENSMUST00000221462 908 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 AC154636.3-201ENSMUST00000221489 1214 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 AC164116.2-201ENSMUST00000225398 1038 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.81□□□□□ -1.64
Ddx58Q6Q899 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm16431-201ENSMUST00000117454 431 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm5943-201ENSMUST00000119458 459 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm12607-201ENSMUST00000120724 493 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm6591-201ENSMUST00000121063 434 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm22219-201ENSMUST00000157562 319 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm23032-201ENSMUST00000157995 107 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm29299-201ENSMUST00000185609 923 ntBASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx58Q6Q899 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms