Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm23424-201ENSMUST00000103889 110 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm24429-201ENSMUST00000104076 132 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm23750-201ENSMUST00000104222 132 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm24789-201ENSMUST00000104282 131 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm13533-201ENSMUST00000121104 177 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm25425-201ENSMUST00000157611 96 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm25333-201ENSMUST00000158035 246 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm32033-201ENSMUST00000193483 339 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm33952-201ENSMUST00000197795 408 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm45422-201ENSMUST00000211476 246 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm22973-201ENSMUST00000083298 191 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm25682-201ENSMUST00000083942 164 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Cpsf6Q6NVF9 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm22468-201ENSMUST00000116680 120 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm26248-201ENSMUST00000116700 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm26137-201ENSMUST00000116701 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm26190-201ENSMUST00000116704 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm24617-201ENSMUST00000116705 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm25778-201ENSMUST00000116713 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm25774-201ENSMUST00000116717 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm22102-201ENSMUST00000116730 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm23177-201ENSMUST00000116784 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm24193-201ENSMUST00000116801 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm24744-201ENSMUST00000116833 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm24427-201ENSMUST00000116896 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm22346-201ENSMUST00000116918 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm23606-201ENSMUST00000116938 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm22029-201ENSMUST00000116940 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm26298-201ENSMUST00000116956 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm23844-201ENSMUST00000116959 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm24484-201ENSMUST00000117009 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm25347-201ENSMUST00000117026 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm22112-201ENSMUST00000117032 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm13973-201ENSMUST00000121371 894 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm25384-201ENSMUST00000157807 105 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm22991-201ENSMUST00000178126 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm7958-201ENSMUST00000178255 468 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm25754-201ENSMUST00000178653 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm22419-201ENSMUST00000178780 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm24802-201ENSMUST00000178897 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm25208-201ENSMUST00000178964 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm24567-201ENSMUST00000179294 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm7950-201ENSMUST00000179633 468 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm23943-201ENSMUST00000179712 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm25228-201ENSMUST00000180121 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm23304-201ENSMUST00000180209 121 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm26960-201ENSMUST00000182263 412 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm27645-201ENSMUST00000183348 77 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Mir6355-201ENSMUST00000183687 106 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm28429-201ENSMUST00000188521 363 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Cpsf6Q6NVF9 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms