Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
Sh3rf1Q69ZI1 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm23744-201ENSMUST00000104231 149 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm24789-201ENSMUST00000104282 131 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm12871-201ENSMUST00000118758 438 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm11975-201ENSMUST00000118772 481 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm11825-201ENSMUST00000120710 736 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm14578-201ENSMUST00000122166 391 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm22355-201ENSMUST00000175531 96 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm20698-201ENSMUST00000175657 233 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm8600-201ENSMUST00000186320 905 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm28683-201ENSMUST00000187134 615 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm28840-205ENSMUST00000189320 615 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm28835-203ENSMUST00000190062 615 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm42828-201ENSMUST00000199669 469 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm45105-201ENSMUST00000207824 397 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.21□□□□□ -1.58
Sh3rf1Q69ZI1 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 AC125532.1-201ENSMUST00000216210 2334 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm12771-201ENSMUST00000120246 135 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Scarna13-201ENSMUST00000158164 275 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Mir5099-201ENSMUST00000175257 74 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Mir7222-201ENSMUST00000183740 75 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm27541-201ENSMUST00000184078 122 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm2914-201ENSMUST00000186120 328 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm28785-201ENSMUST00000187478 379 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm37421-201ENSMUST00000193088 132 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm18468-201ENSMUST00000207321 369 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm18470-201ENSMUST00000207467 420 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm18465-201ENSMUST00000207468 369 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm18464-201ENSMUST00000207803 420 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm18458-201ENSMUST00000207908 369 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm18461-201ENSMUST00000208421 420 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm17999-201ENSMUST00000211568 542 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Gm23514-201ENSMUST00000082827 130 ntBASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sh3rf1Q69ZI1 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sh3rf1Q69ZI1 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms