Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim28Q62318 Igkv13-87-201ENSMUST00000114214 286 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm13321-201ENSMUST00000117101 400 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm11843-201ENSMUST00000118984 425 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm15193-201ENSMUST00000120224 865 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm14605-201ENSMUST00000120599 268 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm22199-201ENSMUST00000122660 126 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm25559-201ENSMUST00000157182 74 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm24014-201ENSMUST00000157728 157 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm24225-201ENSMUST00000158825 98 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm22367-201ENSMUST00000178930 132 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm24949-201ENSMUST00000183609 215 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm37353-201ENSMUST00000194497 313 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm43424-201ENSMUST00000200484 253 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm18672-201ENSMUST00000208035 270 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim28Q62318 Gm46996-201ENSMUST00000220924 408 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 AC160114.1-201ENSMUST00000221930 365 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim28Q62318 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim28Q62318 Mir465c-1-201ENSMUST00000093560 81 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.29□□□□□ -1.56
Trim28Q62318 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim28Q62318 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Trim28Q62318 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim28Q62318 AC154462.1-201ENSMUST00000228897 2260 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim28Q62318 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim28Q62318 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim28Q62318 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim28Q62318 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim28Q62318 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim28Q62318 Gm14293-201ENSMUST00000118528 577 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm11262-201ENSMUST00000119326 833 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm15022-201ENSMUST00000122074 746 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm25292-201ENSMUST00000122797 322 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim28Q62318 Gm25966-201ENSMUST00000157169 117 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm24441-201ENSMUST00000157235 281 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm22084-201ENSMUST00000157585 105 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm25667-201ENSMUST00000157701 275 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm24734-201ENSMUST00000158860 262 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm10067-201ENSMUST00000179462 348 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim28Q62318 Gm27828-201ENSMUST00000184108 119 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim28Q62318 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim28Q62318 Gm17906-201ENSMUST00000202480 901 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm45710-201ENSMUST00000212847 215 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 AC109212.1-201ENSMUST00000215561 427 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 AC073947.3-201ENSMUST00000215576 766 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm19181-201ENSMUST00000218891 940 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 AC116460.1-201ENSMUST00000219040 313 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 AC155929.1-201ENSMUST00000220217 1276 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim28Q62318 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim28Q62318 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim28Q62318 Gm25403-201ENSMUST00000082971 143 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Gm25512-201ENSMUST00000083863 107 ntBASIC5.28□□□□□ -1.56
Trim28Q62318 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim28Q62318 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim28Q62318 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim28Q62318 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim28Q62318 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim28Q62318 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim28Q62318 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim28Q62318 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim28Q62318 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Trim28Q62318 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim28Q62318 Gm24067-201ENSMUST00000104514 85 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm12564-201ENSMUST00000119860 321 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm15019-201ENSMUST00000120148 434 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm13555-201ENSMUST00000121668 319 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm15899-201ENSMUST00000128586 238 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC5.27□□□□□ -1.57
Trim28Q62318 Gm26271-201ENSMUST00000158349 104 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim28Q62318 Gm17919-201ENSMUST00000173344 312 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Ang-ps2-201ENSMUST00000178173 433 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim28Q62318 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Trim28Q62318 Gm3454-201ENSMUST00000185571 412 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm28660-201ENSMUST00000186496 253 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm28474-201ENSMUST00000188501 315 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm28788-201ENSMUST00000189717 375 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm29558-201ENSMUST00000190134 375 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm29552-201ENSMUST00000190548 660 ntBASIC5.27□□□□□ -1.57
Trim28Q62318 Gm37001-201ENSMUST00000193377 190 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms