Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm15377-201ENSMUST00000119594 246 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm11420-201ENSMUST00000120047 402 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm13743-201ENSMUST00000121486 724 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC4.37□□□□□ -1.71
CtcfQ61164 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm25908-201ENSMUST00000157624 98 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm26036-201ENSMUST00000158149 144 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm27522-201ENSMUST00000183949 230 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm27899-201ENSMUST00000184715 64 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm27190-201ENSMUST00000184890 542 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CtcfQ61164 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CtcfQ61164 AC091260.1-201ENSMUST00000216112 229 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 AC116726.2-201ENSMUST00000217629 986 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 AC156952.1-201ENSMUST00000220361 793 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gm5374-201ENSMUST00000222868 657 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcfQ61164 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Mir383-201ENSMUST00000083523 70 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Mir16-2-201ENSMUST00000083672 95 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm7381-201ENSMUST00000098958 300 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcfQ61164 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcfQ61164 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.37□□□□□ -1.71
CtcfQ61164 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CtcfQ61164 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CtcfQ61164 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CtcfQ61164 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CtcfQ61164 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CtcfQ61164 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm7739-201ENSMUST00000221131 1560 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CtcfQ61164 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CtcfQ61164 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CtcfQ61164 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CtcfQ61164 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm42534-201ENSMUST00000196063 1754 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm11488-201ENSMUST00000117277 863 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm12190-201ENSMUST00000120001 187 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm14600-201ENSMUST00000121032 630 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm23505-201ENSMUST00000158989 130 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm27733-201ENSMUST00000184803 68 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm28655-201ENSMUST00000191538 692 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm37979-201ENSMUST00000193065 712 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm37836-201ENSMUST00000195875 175 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm4248-201ENSMUST00000196905 316 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.36□□□□□ -1.71
CtcfQ61164 Gm44583-201ENSMUST00000207478 281 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm18644-201ENSMUST00000211458 815 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.36□□□□□ -1.71
CtcfQ61164 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 AC121960.3-201ENSMUST00000227077 623 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CtcfQ61164 Mir193a-201ENSMUST00000083461 66 ntBASIC4.36□□□□□ -1.71
CtcfQ61164 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CtcfQ61164 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms