Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm23608-201ENSMUST00000104545 128 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm5754-201ENSMUST00000118774 892 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm12238-201ENSMUST00000127764 124 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm23465-201ENSMUST00000157134 262 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm22870-201ENSMUST00000157501 112 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm22637-201ENSMUST00000158144 283 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm25436-201ENSMUST00000158275 145 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Snord53-201ENSMUST00000175146 78 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm23190-201ENSMUST00000180307 64 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm26746-201ENSMUST00000181722 487 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm28169-201ENSMUST00000190342 345 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm37037-201ENSMUST00000194475 424 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm18445-201ENSMUST00000195502 774 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm43669-201ENSMUST00000198229 436 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm43945-201ENSMUST00000203595 754 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 AC125350.4-201ENSMUST00000225895 273 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm23407-201ENSMUST00000082538 91 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Mir21a-201ENSMUST00000083521 92 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Mir7-2-201ENSMUST00000083675 97 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm3584-201ENSMUST00000173822 2565 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm44120-201ENSMUST00000203022 3023 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 AC123052.1-201ENSMUST00000220604 4616 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm22020-201ENSMUST00000104358 136 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm14448-201ENSMUST00000116383 210 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm5762-201ENSMUST00000119204 258 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm12543-201ENSMUST00000120410 543 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm15480-201ENSMUST00000120442 519 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm12650-201ENSMUST00000121966 258 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm15466-201ENSMUST00000122299 333 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm16363-201ENSMUST00000132460 877 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Snora81-201ENSMUST00000157310 178 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm23755-201ENSMUST00000157578 343 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm23775-201ENSMUST00000158991 249 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm26928-201ENSMUST00000182674 572 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Mir8118-201ENSMUST00000183962 129 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Mir7212-201ENSMUST00000184098 61 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm29159-201ENSMUST00000187969 379 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm18181-201ENSMUST00000190670 736 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm36934-201ENSMUST00000192007 306 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm6680-201ENSMUST00000192789 950 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm19231-201ENSMUST00000193212 830 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm37416-201ENSMUST00000193596 318 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Trbv8-201ENSMUST00000194020 285 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm29747-201ENSMUST00000194764 585 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 AC142113.2-201ENSMUST00000217425 748 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 AC132384.9-201ENSMUST00000218085 277 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm3565-201ENSMUST00000222670 609 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 AC133189.2-201ENSMUST00000228527 392 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm22979-201ENSMUST00000082609 159 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm10221-201ENSMUST00000088299 309 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 Gm42659-201ENSMUST00000196955 1754 ntBASIC1.98□□□□□ -2.09
Trav3-1Q5R1I8 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trav3-1Q5R1I8 Gm22661-201ENSMUST00000104192 132 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms