Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trav8d-2Q5R1B6 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm22939-201ENSMUST00000103958 131 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm22019-201ENSMUST00000104359 96 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm14586-201ENSMUST00000119571 408 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm12294-201ENSMUST00000119723 490 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm11448-201ENSMUST00000120427 450 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm11896-201ENSMUST00000121105 820 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm14463-201ENSMUST00000121117 498 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm11797-201ENSMUST00000121336 754 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm5123-201ENSMUST00000121905 837 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm5755-201ENSMUST00000152394 837 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm26487-201ENSMUST00000158022 94 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm22764-201ENSMUST00000158370 92 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm28598-201ENSMUST00000186490 615 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm29268-201ENSMUST00000188669 615 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm29218-205ENSMUST00000190846 615 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm28978-201ENSMUST00000191120 615 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm17790-201ENSMUST00000191545 1228 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm37172-201ENSMUST00000191926 615 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm43214-201ENSMUST00000199242 352 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm7726-201ENSMUST00000206241 231 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm17917-201ENSMUST00000218561 953 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Trav8d-2Q5R1B6 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Mir804-201ENSMUST00000103251 95 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm24119-201ENSMUST00000103979 246 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm12313-201ENSMUST00000121347 421 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm12226-201ENSMUST00000144172 876 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm23585-201ENSMUST00000157656 102 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Adgrg4-206ENSMUST00000168724 531 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm28785-201ENSMUST00000187478 379 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm7182-201ENSMUST00000193351 732 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm43491-201ENSMUST00000197133 784 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm45513-201ENSMUST00000210228 376 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm19987-201ENSMUST00000216339 499 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm35405-201ENSMUST00000218754 400 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm18441-201ENSMUST00000223539 617 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm23846-201ENSMUST00000083835 107 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trav8d-2Q5R1B6 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Gm15382-201ENSMUST00000118011 537 ntBASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Gm14162-201ENSMUST00000121985 601 ntBASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Gm24787-201ENSMUST00000157380 123 ntBASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Gm26171-201ENSMUST00000158422 131 ntBASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.29□□□□□ -1.88
Trav8d-2Q5R1B6 Gm27783-201ENSMUST00000183534 105 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms