Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 AC154511.1-201ENSMUST00000222578 1587 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm11432-201ENSMUST00000117334 231 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm12386-201ENSMUST00000117380 688 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm15126-201ENSMUST00000118631 833 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm14307-201ENSMUST00000118930 291 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm14883-201ENSMUST00000120179 157 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Clec2f-201ENSMUST00000121051 374 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm14297-201ENSMUST00000129110 291 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm5924-201ENSMUST00000132554 871 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm16362-201ENSMUST00000135189 214 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm23435-201ENSMUST00000157183 156 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm25456-201ENSMUST00000157952 109 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm17030-201ENSMUST00000167016 393 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Snord116l12-201ENSMUST00000179816 94 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm7870-201ENSMUST00000184467 616 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm29228-201ENSMUST00000185489 418 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm28700-201ENSMUST00000187614 579 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm29479-201ENSMUST00000190352 455 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm37050-201ENSMUST00000193464 466 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm19089-201ENSMUST00000197207 613 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm17956-201ENSMUST00000199931 838 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm44002-201ENSMUST00000205134 594 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm45189-201ENSMUST00000208567 363 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 AC116460.1-201ENSMUST00000219040 313 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm7133-201ENSMUST00000187797 2039 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col28a1Q2UY11 Gm6757-201ENSMUST00000189810 1706 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm22758-201ENSMUST00000102275 96 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm23273-201ENSMUST00000104058 135 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm23481-201ENSMUST00000104173 131 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm26019-201ENSMUST00000104407 119 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm14750-201ENSMUST00000118262 516 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm5942-201ENSMUST00000120046 439 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm14656-201ENSMUST00000120342 502 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm16445-201ENSMUST00000120399 714 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm5646-201ENSMUST00000120568 714 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm14986-201ENSMUST00000121262 1002 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm14530-201ENSMUST00000122391 333 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm26349-201ENSMUST00000157530 130 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm23032-201ENSMUST00000157995 107 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm9593-201ENSMUST00000166034 469 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm5929-201ENSMUST00000166883 487 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm9613-201ENSMUST00000171662 196 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm18522-201ENSMUST00000173947 650 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm15143-201ENSMUST00000178180 714 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm27599-201ENSMUST00000183758 174 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm8392-201ENSMUST00000185647 835 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm19503-201ENSMUST00000187109 241 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm29848-201ENSMUST00000203107 295 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm7039-201ENSMUST00000205138 346 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm45200-201ENSMUST00000207434 919 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col28a1Q2UY11 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms