Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 AC165293.1-201ENSMUST00000219669 329 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 AC121942.2-201ENSMUST00000223824 600 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 AC166830.2-201ENSMUST00000225821 196 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col9a1Q05722 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col9a1Q05722 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.94□□□□□ -1.46
Col9a1Q05722 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col9a1Q05722 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col9a1Q05722 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC5.94□□□□□ -1.46
Col9a1Q05722 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col9a1Q05722 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col9a1Q05722 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col9a1Q05722 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col9a1Q05722 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col9a1Q05722 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col9a1Q05722 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Col9a1Q05722 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col9a1Q05722 Gm11677-201ENSMUST00000121349 977 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Gm23642-201ENSMUST00000157858 258 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 Gm25716-201ENSMUST00000158628 104 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 Gm26028-201ENSMUST00000158660 294 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 Mir1a-2-201ENSMUST00000198520 72 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 Gm42526-201ENSMUST00000198956 393 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC5.93□□□□□ -1.46
Col9a1Q05722 Gm44520-201ENSMUST00000205447 802 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.93□□□□□ -1.46
Col9a1Q05722 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 AC165106.1-201ENSMUST00000227580 408 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Col9a1Q05722 Gm24616-201ENSMUST00000083274 139 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col9a1Q05722 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Col9a1Q05722 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col9a1Q05722 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col9a1Q05722 Gm44898-201ENSMUST00000205934 2223 ntBASIC5.93□□□□□ -1.46
Col9a1Q05722 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col9a1Q05722 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col9a1Q05722 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col9a1Q05722 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm23577-201ENSMUST00000103950 110 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm23593-201ENSMUST00000104309 120 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm24987-201ENSMUST00000104453 134 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm15044-201ENSMUST00000120703 598 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm14694-201ENSMUST00000121856 282 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm14770-201ENSMUST00000122197 312 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm22321-201ENSMUST00000157152 104 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm22214-201ENSMUST00000157563 172 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm17511-201ENSMUST00000172206 342 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm20450-201ENSMUST00000173652 147 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm24520-201ENSMUST00000179510 110 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm9687-201ENSMUST00000189312 602 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm45007-201ENSMUST00000206237 366 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm5215-201ENSMUST00000054380 405 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm25814-201ENSMUST00000082754 107 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm22685-201ENSMUST00000082848 106 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Col9a1Q05722 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
Col9a1Q05722 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.92□□□□□ -1.46
Col9a1Q05722 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col9a1Q05722 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col9a1Q05722 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC5.92□□□□□ -1.46
Col9a1Q05722 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms