Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.51□□□□□ -1.53
Col6a1Q04857 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Col6a1Q04857 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col6a1Q04857 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm23593-201ENSMUST00000104309 120 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm12765-201ENSMUST00000117273 615 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm11577-201ENSMUST00000118030 737 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm11196-201ENSMUST00000119052 395 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm14129-201ENSMUST00000122436 291 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Zakit-201ENSMUST00000157677 308 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm26362-201ENSMUST00000158865 315 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm27568-201ENSMUST00000184220 99 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm28506-201ENSMUST00000189937 150 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm8599-201ENSMUST00000193033 457 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a1Q04857 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Col6a1Q04857 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm44078-201ENSMUST00000204652 2646 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Col6a1Q04857 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.5□□□□□ -1.53
Col6a1Q04857 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Col6a1Q04857 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.5□□□□□ -1.53
Col6a1Q04857 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Col6a1Q04857 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Col6a1Q04857 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.49□□□□□ -1.53
Col6a1Q04857 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Col6a1Q04857 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm44679-201ENSMUST00000207202 2908 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a1Q04857 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm25419-201ENSMUST00000104215 191 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm23653-201ENSMUST00000116751 97 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm15206-201ENSMUST00000119143 454 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm11790-201ENSMUST00000119569 455 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm22613-201ENSMUST00000122679 292 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC5.49□□□□□ -1.53
Col6a1Q04857 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm28995-201ENSMUST00000186625 261 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm5285-201ENSMUST00000193089 666 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.49□□□□□ -1.53
Col6a1Q04857 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC5.49□□□□□ -1.53
Col6a1Q04857 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 AC154271.1-201ENSMUST00000224780 383 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col6a1Q04857 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a1Q04857 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Col6a1Q04857 Snord59a-201ENSMUST00000082844 74 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Col6a1Q04857 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.49□□□□□ -1.53
Col6a1Q04857 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a1Q04857 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a1Q04857 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Col6a1Q04857 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Col6a1Q04857 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Smc5-206ENSMUST00000226111 3265 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Col6a1Q04857 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.48□□□□□ -1.53
Col6a1Q04857 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Col6a1Q04857 Mir292-201ENSMUST00000104847 82 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms