Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm24890-201ENSMUST00000104389 102 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Gm23530-201ENSMUST00000104564 137 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm13873-201ENSMUST00000119208 427 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm26371-201ENSMUST00000157829 104 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Gm25520-201ENSMUST00000158389 118 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm28002-201ENSMUST00000184832 100 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm28923-201ENSMUST00000187755 322 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm28060-201ENSMUST00000191554 189 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm45474-201ENSMUST00000209471 408 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.38□□□□□ -1.87
Trim43bP86448 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim43bP86448 Gm10237-201ENSMUST00000078393 273 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim43bP86448 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim43bP86448 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.38□□□□□ -1.87
Trim43bP86448 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim43bP86448 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Trim43bP86448 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim43bP86448 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43bP86448 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43bP86448 Gm14811-201ENSMUST00000117070 117 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm12902-201ENSMUST00000118389 322 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm14253-201ENSMUST00000122112 639 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm22956-201ENSMUST00000122520 80 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm23791-201ENSMUST00000122553 293 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm23667-201ENSMUST00000157466 120 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm24965-201ENSMUST00000157922 106 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm29064-201ENSMUST00000187014 813 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim43bP86448 Gm28877-201ENSMUST00000191349 604 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.37□□□□□ -1.87
Trim43bP86448 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm43308-201ENSMUST00000197236 373 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm29815-201ENSMUST00000202418 178 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm17917-201ENSMUST00000218561 953 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim43bP86448 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43bP86448 Gm4987-201ENSMUST00000078326 408 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43bP86448 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43bP86448 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43bP86448 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim43bP86448 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.37□□□□□ -1.87
Trim43bP86448 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim43bP86448 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.36□□□□□ -1.87
Trim43bP86448 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Trim43bP86448 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.36□□□□□ -1.87
Trim43bP86448 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim43bP86448 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.36□□□□□ -1.87
Trim43bP86448 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim43bP86448 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim43bP86448 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.36□□□□□ -1.87
Trim43bP86448 Gm20612-201ENSMUST00000176318 236 ntBASIC3.36□□□□□ -1.87
Trim43bP86448 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim43bP86448 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim43bP86448 Mir6413-201ENSMUST00000184049 108 ntBASIC3.36□□□□□ -1.87
Trim43bP86448 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.36□□□□□ -1.87
Trim43bP86448 Trbv27-201ENSMUST00000193711 277 ntBASIC3.36□□□□□ -1.87
Trim43bP86448 Gm43090-201ENSMUST00000202459 314 ntBASIC3.36□□□□□ -1.87
Trim43bP86448 Gm32381-201ENSMUST00000203192 476 ntBASIC3.36□□□□□ -1.87
Trim43bP86448 Gm44118-201ENSMUST00000204665 229 ntBASIC3.36□□□□□ -1.87
Trim43bP86448 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Trim43bP86448 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Trim43bP86448 Snord35b-201ENSMUST00000082833 87 ntBASIC3.36□□□□□ -1.87
Trim43bP86448 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim43bP86448 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.35□□□□□ -1.87
Trim43bP86448 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim43bP86448 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trim43bP86448 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim43bP86448 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms