Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Gm17915-201ENSMUST00000222077 548 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Rfx1P48377 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Rfx1P48377 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Rfx1P48377 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm25579-201ENSMUST00000083407 106 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.88□□□□□ -1.47
Rfx1P48377 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Rfx1P48377 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Rfx1P48377 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Rfx1P48377 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Rfx1P48377 Gm13961-201ENSMUST00000119282 4772 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gm37761-201ENSMUST00000194989 2098 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Rfx1P48377 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Rfx1P48377 Gm13491-201ENSMUST00000118267 235 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gm15988-201ENSMUST00000118677 367 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Rfx1P48377 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Rfx1P48377 Gm4222-201ENSMUST00000165784 470 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gm7925-201ENSMUST00000166690 401 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.87□□□□□ -1.47
Rfx1P48377 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Rfx1P48377 Gm10784-201ENSMUST00000178715 238 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gm23191-201ENSMUST00000179147 107 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gm22633-201ENSMUST00000179834 107 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gm27190-201ENSMUST00000184890 542 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.87□□□□□ -1.47
Rfx1P48377 Gm37743-201ENSMUST00000194645 376 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gm38670-201ENSMUST00000199248 77 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gm44059-201ENSMUST00000204048 351 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC5.87□□□□□ -1.47
Rfx1P48377 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.87□□□□□ -1.47
Rfx1P48377 AC160016.1-201ENSMUST00000215589 448 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Gm18409-202ENSMUST00000220105 529 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.87□□□□□ -1.47
Rfx1P48377 AC124489.2-201ENSMUST00000223930 589 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Rfx1P48377 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Rfx1P48377 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Olfr895-201ENSMUST00000093864 951 ntBASIC5.87□□□□□ -1.47
Rfx1P48377 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Rfx1P48377 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Rfx1P48377 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Rfx1P48377 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Rfx1P48377 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Rfx1P48377 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.87□□□□□ -1.47
Rfx1P48377 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Rfx1P48377 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm24429-201ENSMUST00000104076 132 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm24170-201ENSMUST00000104124 133 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Rfx1P48377 Gm14897-201ENSMUST00000118213 207 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm12423-201ENSMUST00000118334 135 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm11429-201ENSMUST00000119089 144 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Rfx1P48377 Gm23993-201ENSMUST00000157478 144 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm25865-201ENSMUST00000158247 104 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm7609-204ENSMUST00000161424 461 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm22242-201ENSMUST00000175224 118 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm26189-201ENSMUST00000179879 107 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC5.86□□□□□ -1.47
Rfx1P48377 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC5.86□□□□□ -1.47
Rfx1P48377 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC5.86□□□□□ -1.47
Rfx1P48377 Gm44060-201ENSMUST00000204440 410 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm20039-201ENSMUST00000210329 394 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm39197-201ENSMUST00000212069 457 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.86□□□□□ -1.47
Rfx1P48377 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Gm7768-201ENSMUST00000222988 597 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Rfx1P48377 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Rfx1P48377 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Rfx1P48377 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Rfx1P48377 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Rfx1P48377 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.86□□□□□ -1.47
Rfx1P48377 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Rfx1P48377 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Rfx1P48377 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Rfx1P48377 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Rfx1P48377 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Rfx1P48377 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.85□□□□□ -1.47
Rfx1P48377 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.85□□□□□ -1.47
Rfx1P48377 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Rfx1P48377 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Rfx1P48377 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Rfx1P48377 Gm12255-201ENSMUST00000117184 284 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm13085-201ENSMUST00000118356 171 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm14008-201ENSMUST00000120483 274 ntBASIC5.85□□□□□ -1.47
Rfx1P48377 Gm11677-201ENSMUST00000121349 977 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms