Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm29573-201ENSMUST00000190291 919 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm28484-201ENSMUST00000190606 312 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm18384-201ENSMUST00000195974 808 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm43407-201ENSMUST00000199816 317 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm43478-201ENSMUST00000200381 292 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.89□□□□□ -1.95
Sdc1P18828 AC123835.1-201ENSMUST00000214362 670 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Supt4b-201ENSMUST00000214434 351 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm18015-201ENSMUST00000214879 316 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21089-201ENSMUST00000215843 325 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm8681-201ENSMUST00000219115 618 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm45965-201ENSMUST00000221192 1284 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm14387-201ENSMUST00000121827 2055 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm6545-201ENSMUST00000217186 1786 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Sdc1P18828 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm45662-201ENSMUST00000210054 2098 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm23133-201ENSMUST00000104255 135 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Gm24890-201ENSMUST00000104389 102 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Gm14578-201ENSMUST00000122166 391 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC2.88□□□□□ -1.95
Sdc1P18828 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Sdc1P18828 Magea9-ps-202ENSMUST00000167328 899 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC2.88□□□□□ -1.95
Sdc1P18828 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Sdc1P18828 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm25120-201ENSMUST00000180148 79 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Gm24969-201ENSMUST00000180331 79 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm28146-201ENSMUST00000185517 701 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC2.88□□□□□ -1.95
Sdc1P18828 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm9687-201ENSMUST00000189312 602 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm43239-201ENSMUST00000200131 201 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Gm43441-201ENSMUST00000201458 205 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.88□□□□□ -1.95
Sdc1P18828 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC2.88□□□□□ -1.95
Sdc1P18828 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Sdc1P18828 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Sdc1P18828 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Sdc1P18828 AC154184.1-201ENSMUST00000224375 1620 ntBASIC2.88□□□□□ -1.95
Sdc1P18828 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Sdc1P18828 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Sdc1P18828 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Sdc1P18828 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Sdc1P18828 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Sdc1P18828 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Sdc1P18828 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Sdc1P18828 Gm24117-201ENSMUST00000103973 133 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm24671-201ENSMUST00000104159 158 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Snora64-201ENSMUST00000104521 134 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm7123-201ENSMUST00000117647 213 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm12492-201ENSMUST00000117665 564 ntBASIC2.87□□□□□ -1.95
Sdc1P18828 Gm15313-201ENSMUST00000119179 282 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 148.1 ms