Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC3.41□□□□□ -1.86
Col1a1P11087 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Col1a1P11087 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Col1a1P11087 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.41□□□□□ -1.86
Col1a1P11087 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col1a1P11087 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col1a1P11087 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
Col1a1P11087 Gm14912-201ENSMUST00000120166 1773 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Col1a1P11087 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col1a1P11087 Mir499-201ENSMUST00000102357 79 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 Gm26247-201ENSMUST00000116702 91 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 Gm24274-201ENSMUST00000116787 124 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 Gm9078-201ENSMUST00000119126 617 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 Gm12739-201ENSMUST00000119769 382 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
Col1a1P11087 Gm24291-201ENSMUST00000157633 162 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col1a1P11087 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col1a1P11087 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col1a1P11087 Mir3076-201ENSMUST00000175415 60 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 Gm38334-201ENSMUST00000195060 313 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 Gm20946-201ENSMUST00000212367 461 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.41□□□□□ -1.86
Col1a1P11087 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col1a1P11087 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col1a1P11087 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col1a1P11087 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col1a1P11087 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col1a1P11087 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col1a1P11087 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Col1a1P11087 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
Col1a1P11087 Gm650-201ENSMUST00000144428 1551 ntBASIC3.4□□□□□ -1.87
Col1a1P11087 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Col1a1P11087 Mir466k-201ENSMUST00000116774 122 ntBASIC3.4□□□□□ -1.87
Col1a1P11087 Gm16471-201ENSMUST00000121940 618 ntBASIC3.4□□□□□ -1.87
Col1a1P11087 Gm19694-201ENSMUST00000192364 505 ntBASIC3.4□□□□□ -1.87
Col1a1P11087 Gm43478-201ENSMUST00000200381 292 ntBASIC3.4□□□□□ -1.87
Col1a1P11087 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Col1a1P11087 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.39□□□□□ -1.87
Col1a1P11087 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Col1a1P11087 Gm25466-201ENSMUST00000103995 132 ntBASIC3.39□□□□□ -1.87
Col1a1P11087 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col1a1P11087 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.39□□□□□ -1.87
Col1a1P11087 Gm20718-201ENSMUST00000176058 259 ntBASIC3.39□□□□□ -1.87
Col1a1P11087 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col1a1P11087 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.39□□□□□ -1.87
Col1a1P11087 Gm28628-201ENSMUST00000187006 264 ntBASIC3.39□□□□□ -1.87
Col1a1P11087 Gm28629-201ENSMUST00000187309 263 ntBASIC3.39□□□□□ -1.87
Col1a1P11087 Gm37433-201ENSMUST00000192695 678 ntBASIC3.39□□□□□ -1.87
Col1a1P11087 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.39□□□□□ -1.87
Col1a1P11087 Gm37441-201ENSMUST00000194430 678 ntBASIC3.39□□□□□ -1.87
Col1a1P11087 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC3.39□□□□□ -1.87
Col1a1P11087 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.39□□□□□ -1.87
Col1a1P11087 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col1a1P11087 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col1a1P11087 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Col1a1P11087 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.38□□□□□ -1.87
Col1a1P11087 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC3.38□□□□□ -1.87
Col1a1P11087 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col1a1P11087 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col1a1P11087 Gm14578-201ENSMUST00000122166 391 ntBASIC3.38□□□□□ -1.87
Col1a1P11087 Gm22600-201ENSMUST00000157598 269 ntBASIC3.38□□□□□ -1.87
Col1a1P11087 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC3.38□□□□□ -1.87
Col1a1P11087 Gm6245-201ENSMUST00000164699 768 ntBASIC3.38□□□□□ -1.87
Col1a1P11087 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col1a1P11087 Gm20612-201ENSMUST00000176318 236 ntBASIC3.38□□□□□ -1.87
Col1a1P11087 Gm27648-201ENSMUST00000184315 107 ntBASIC3.38□□□□□ -1.87
Col1a1P11087 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col1a1P11087 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC3.38□□□□□ -1.87
Col1a1P11087 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC3.38□□□□□ -1.87
Col1a1P11087 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col1a1P11087 Diaph3-206ENSMUST00000226745 713 ntBASIC3.38□□□□□ -1.87
Col1a1P11087 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col1a1P11087 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.38□□□□□ -1.87
Col1a1P11087 Gm42841-201ENSMUST00000199806 1932 ntBASIC3.38□□□□□ -1.87
Col1a1P11087 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.38□□□□□ -1.87
Col1a1P11087 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Col1a1P11087 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col1a1P11087 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Col1a1P11087 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.37□□□□□ -1.87
Col1a1P11087 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.37□□□□□ -1.87
Col1a1P11087 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Col1a1P11087 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC3.37□□□□□ -1.87
Col1a1P11087 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.37□□□□□ -1.87
Col1a1P11087 Gm12598-201ENSMUST00000117333 830 ntBASIC3.37□□□□□ -1.87
Col1a1P11087 Gm14593-201ENSMUST00000119948 294 ntBASIC3.37□□□□□ -1.87
Col1a1P11087 Gm24937-201ENSMUST00000122597 134 ntBASIC3.37□□□□□ -1.87
Col1a1P11087 Gm23325-201ENSMUST00000157422 129 ntBASIC3.37□□□□□ -1.87
Col1a1P11087 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col1a1P11087 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Col1a1P11087 Gm26993-201ENSMUST00000182766 789 ntBASIC3.37□□□□□ -1.87
Col1a1P11087 Mir7242-201ENSMUST00000183710 79 ntBASIC3.37□□□□□ -1.87
Col1a1P11087 Gm42990-201ENSMUST00000199231 312 ntBASIC3.37□□□□□ -1.87
Col1a1P11087 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC3.37□□□□□ -1.87
Col1a1P11087 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col1a1P11087 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.37□□□□□ -1.87
Col1a1P11087 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms