Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm17771-201ENSMUST00000194477 1147 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm43810-201ENSMUST00000201018 232 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm44513-201ENSMUST00000206811 439 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm29920-201ENSMUST00000206876 754 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm45200-201ENSMUST00000207434 919 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm9375-201ENSMUST00000208899 903 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm29817-201ENSMUST00000210098 172 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm21007-201ENSMUST00000221024 326 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC4.22□□□□□ -1.73
Hoxc6P10629 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxc6P10629 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Hoxc6P10629 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Hoxc6P10629 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Hoxc6P10629 Snord15a-201ENSMUST00000083888 148 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm6361-201ENSMUST00000091031 435 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxc6P10629 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC4.22□□□□□ -1.73
Hoxc6P10629 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm36962-201ENSMUST00000192114 1761 ntBASIC4.22□□□□□ -1.73
Hoxc6P10629 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Hoxc6P10629 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.21□□□□□ -1.73
Hoxc6P10629 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Hoxc6P10629 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.21□□□□□ -1.73
Hoxc6P10629 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.21□□□□□ -1.73
Hoxc6P10629 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Hoxc6P10629 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm22472-201ENSMUST00000104115 134 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm12825-201ENSMUST00000120249 563 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm15157-201ENSMUST00000121852 702 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm11834-201ENSMUST00000122257 585 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm26352-201ENSMUST00000158223 125 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm24675-201ENSMUST00000158757 259 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm17060-201ENSMUST00000172394 824 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm26194-201ENSMUST00000175036 71 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm28010-201ENSMUST00000179485 126 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm43217-201ENSMUST00000199513 367 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm44058-201ENSMUST00000204335 467 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.21□□□□□ -1.74
Hoxc6P10629 AC124729.1-202ENSMUST00000225587 938 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 AC130823.2-201ENSMUST00000226169 290 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.21□□□□□ -1.74
Hoxc6P10629 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Hoxc6P10629 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Hoxc6P10629 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxc6P10629 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hoxc6P10629 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hoxc6P10629 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.2□□□□□ -1.74
Hoxc6P10629 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Hoxc6P10629 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hoxc6P10629 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Hoxc6P10629 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxc6P10629 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hoxc6P10629 Mir673-201ENSMUST00000102361 91 ntBASIC4.2□□□□□ -1.74
Hoxc6P10629 Gm12448-201ENSMUST00000118852 655 ntBASIC4.2□□□□□ -1.74
Hoxc6P10629 Gm14945-201ENSMUST00000119556 1118 ntBASIC4.2□□□□□ -1.74
Hoxc6P10629 Gm15926-201ENSMUST00000120492 550 ntBASIC4.2□□□□□ -1.74
Hoxc6P10629 Gm22478-201ENSMUST00000122570 154 ntBASIC4.2□□□□□ -1.74
Hoxc6P10629 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Hoxc6P10629 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.2□□□□□ -1.74
Hoxc6P10629 Gm24441-201ENSMUST00000157235 281 ntBASIC4.2□□□□□ -1.74
Hoxc6P10629 Gm24244-201ENSMUST00000157317 130 ntBASIC4.2□□□□□ -1.74
Hoxc6P10629 Gm25860-201ENSMUST00000158252 126 ntBASIC4.2□□□□□ -1.74
Hoxc6P10629 Gm23022-201ENSMUST00000158768 180 ntBASIC4.2□□□□□ -1.74
Hoxc6P10629 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Hoxc6P10629 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms