Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Gm5373-201ENSMUST00000212113 1050 ntBASIC2.56□□□□□ -2
Sh2d1aO88890 AC152946.2-201ENSMUST00000219071 337 ntBASIC2.56□□□□□ -2
Sh2d1aO88890 AC127270.2-201ENSMUST00000221337 247 ntBASIC2.56□□□□□ -2
Sh2d1aO88890 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.56□□□□□ -2
Sh2d1aO88890 Gm9818-201ENSMUST00000050900 255 ntBASIC2.56□□□□□ -2
Sh2d1aO88890 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Sh2d1aO88890 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Sh2d1aO88890 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Sh2d1aO88890 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.56□□□□□ -2
Sh2d1aO88890 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC2.56□□□□□ -2
Sh2d1aO88890 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC2.56□□□□□ -2
Sh2d1aO88890 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Sh2d1aO88890 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Sh2d1aO88890 Gm3956-201ENSMUST00000164882 2560 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sh2d1aO88890 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm23256-201ENSMUST00000102235 110 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm26140-201ENSMUST00000103807 110 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm24125-201ENSMUST00000104105 137 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm12509-201ENSMUST00000118033 609 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm14768-201ENSMUST00000122126 678 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC2.55□□□□□ -2
Sh2d1aO88890 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm24244-201ENSMUST00000157317 130 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm23591-201ENSMUST00000157663 286 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm26362-201ENSMUST00000158865 315 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Sh2d1aO88890 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm20399-201ENSMUST00000174652 132 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm22908-201ENSMUST00000177620 110 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm5527-201ENSMUST00000179821 642 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC2.55□□□□□ -2
Sh2d1aO88890 Mir6943-201ENSMUST00000185186 66 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm8600-201ENSMUST00000186320 905 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm37970-201ENSMUST00000193865 1732 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm43142-201ENSMUST00000198670 361 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm44634-201ENSMUST00000206119 152 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm10988-201ENSMUST00000209150 1088 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm45553-201ENSMUST00000209929 507 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm45316-201ENSMUST00000210128 162 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm18194-201ENSMUST00000210455 481 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sh2d1aO88890 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sh2d1aO88890 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
Sh2d1aO88890 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm24928-201ENSMUST00000083399 107 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Gm25897-201ENSMUST00000083709 107 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sh2d1aO88890 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC2.55□□□□□ -2
Sh2d1aO88890 Gm45809-201ENSMUST00000211661 3894 ntBASIC2.55□□□□□ -2
Sh2d1aO88890 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC2.55□□□□□ -2
Sh2d1aO88890 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Sh2d1aO88890 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Sh2d1aO88890 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.54□□□□□ -2
Sh2d1aO88890 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Sh2d1aO88890 Gm336-201ENSMUST00000186376 1480 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.54□□□□□ -2
Sh2d1aO88890 Gm37965-201ENSMUST00000195304 1362 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC2.54□□□□□ -2
Sh2d1aO88890 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.54□□□□□ -2
Sh2d1aO88890 Gm26418-201ENSMUST00000104275 137 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm13678-201ENSMUST00000118926 340 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm14627-201ENSMUST00000118931 567 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm12118-201ENSMUST00000119766 532 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm15244-201ENSMUST00000121122 130 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm22480-201ENSMUST00000122568 128 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.54□□□□□ -2
Sh2d1aO88890 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC2.54□□□□□ -2
Sh2d1aO88890 Gm23123-201ENSMUST00000157648 144 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm24727-201ENSMUST00000158231 144 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm23387-201ENSMUST00000158586 107 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm22890-201ENSMUST00000158642 144 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC2.54□□□□□ -2
Sh2d1aO88890 Gm17063-201ENSMUST00000168135 456 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm17164-201ENSMUST00000169013 506 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm22120-201ENSMUST00000175590 70 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm29408-201ENSMUST00000187536 216 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC2.54□□□□□ -2
Sh2d1aO88890 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC2.54□□□□□ -2
Sh2d1aO88890 Gm37698-201ENSMUST00000192605 463 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm37001-201ENSMUST00000193377 190 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm20162-201ENSMUST00000193629 871 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm37791-201ENSMUST00000195081 286 ntBASIC2.54□□□□□ -2
Sh2d1aO88890 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC2.54□□□□□ -2
Sh2d1aO88890 Gm9632-201ENSMUST00000195934 643 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms