Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col5a1O88207 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col5a1O88207 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.83□□□□□ -1.96
Col5a1O88207 Gm8392-201ENSMUST00000185647 835 ntBASIC2.83□□□□□ -1.96
Col5a1O88207 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Col5a1O88207 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.83□□□□□ -1.96
Col5a1O88207 Gm9023-201ENSMUST00000198408 1038 ntBASIC2.83□□□□□ -1.96
Col5a1O88207 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.83□□□□□ -1.96
Col5a1O88207 Gm44694-201ENSMUST00000205317 1298 ntBASIC2.83□□□□□ -1.96
Col5a1O88207 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.83□□□□□ -1.96
Col5a1O88207 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col5a1O88207 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col5a1O88207 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col5a1O88207 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col5a1O88207 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col5a1O88207 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Col5a1O88207 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
Col5a1O88207 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC2.83□□□□□ -1.96
Col5a1O88207 Gm38090-201ENSMUST00000195733 1942 ntBASIC2.83□□□□□ -1.96
Col5a1O88207 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Col5a1O88207 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col5a1O88207 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.82□□□□□ -1.96
Col5a1O88207 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.82□□□□□ -1.96
Col5a1O88207 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Gm21893-201ENSMUST00000179119 397 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Gm27648-201ENSMUST00000184315 107 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Gm28002-201ENSMUST00000184832 100 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC2.82□□□□□ -1.96
Col5a1O88207 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col5a1O88207 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col5a1O88207 AC153361.1-201ENSMUST00000219679 247 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC2.82□□□□□ -1.96
Col5a1O88207 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col5a1O88207 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col5a1O88207 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col5a1O88207 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col5a1O88207 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col5a1O88207 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
Col5a1O88207 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col5a1O88207 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col5a1O88207 Gm7195-201ENSMUST00000190869 1707 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
Col5a1O88207 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC2.82□□□□□ -1.96
Col5a1O88207 Gm14943-201ENSMUST00000118056 546 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Gm13121-201ENSMUST00000120637 632 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Gm13366-201ENSMUST00000122198 970 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC2.82□□□□□ -1.96
Col5a1O88207 Mir8116-201ENSMUST00000184134 97 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC2.82□□□□□ -1.96
Col5a1O88207 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC2.82□□□□□ -1.96
Col5a1O88207 Gm44277-201ENSMUST00000205128 649 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.82□□□□□ -1.96
Col5a1O88207 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col5a1O88207 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.82□□□□□ -1.96
Col5a1O88207 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.82□□□□□ -1.96
Col5a1O88207 AC158142.3-201ENSMUST00000226230 675 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 AC154730.1-201ENSMUST00000227874 816 ntBASIC2.82□□□□□ -1.96
Col5a1O88207 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
Col5a1O88207 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col5a1O88207 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col5a1O88207 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Col5a1O88207 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
Col5a1O88207 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col5a1O88207 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col5a1O88207 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col5a1O88207 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Col5a1O88207 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col5a1O88207 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col5a1O88207 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
Col5a1O88207 Gm23207-201ENSMUST00000158665 102 ntBASIC2.81□□□□□ -1.96
Col5a1O88207 Gm24816-201ENSMUST00000175311 151 ntBASIC2.81□□□□□ -1.96
Col5a1O88207 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col5a1O88207 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col5a1O88207 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Col5a1O88207 Gm27468-201ENSMUST00000183577 106 ntBASIC2.81□□□□□ -1.96
Col5a1O88207 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Col5a1O88207 Gm38041-201ENSMUST00000194445 661 ntBASIC2.81□□□□□ -1.96
Col5a1O88207 Gm43601-201ENSMUST00000196294 945 ntBASIC2.81□□□□□ -1.96
Col5a1O88207 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Col5a1O88207 Gm43316-201ENSMUST00000197252 1295 ntBASIC2.81□□□□□ -1.96
Col5a1O88207 Gm6230-201ENSMUST00000208077 780 ntBASIC2.81□□□□□ -1.96
Col5a1O88207 Gm10025-201ENSMUST00000079568 372 ntBASIC2.81□□□□□ -1.96
Col5a1O88207 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col5a1O88207 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Col5a1O88207 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col5a1O88207 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC2.81□□□□□ -1.96
Col5a1O88207 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Col5a1O88207 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC2.81□□□□□ -1.96
Col5a1O88207 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col5a1O88207 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col5a1O88207 Gm22730-201ENSMUST00000158085 171 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.8□□□□□ -1.96
Col5a1O88207 Gm26993-201ENSMUST00000182766 789 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 Gm28534-201ENSMUST00000187744 676 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.8□□□□□ -1.96
Col5a1O88207 Mir378a-201ENSMUST00000198300 66 ntBASIC2.8□□□□□ -1.96
Col5a1O88207 Gm45072-201ENSMUST00000208673 929 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms