Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm14765-201ENSMUST00000121954 326 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm25184-201ENSMUST00000157753 163 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm25555-201ENSMUST00000158078 111 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm20401-201ENSMUST00000173717 212 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Mir3964-201ENSMUST00000174898 74 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm20657-201ENSMUST00000177079 515 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm22991-201ENSMUST00000178126 121 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm25754-201ENSMUST00000178653 121 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm22419-201ENSMUST00000178780 121 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm24802-201ENSMUST00000178897 121 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm25208-201ENSMUST00000178964 121 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm24567-201ENSMUST00000179294 121 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm23943-201ENSMUST00000179712 121 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm25228-201ENSMUST00000180121 121 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm23304-201ENSMUST00000180209 121 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Mir6539-201ENSMUST00000183732 110 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Mir7037-201ENSMUST00000184414 65 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm21856-201ENSMUST00000187547 696 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm29196-201ENSMUST00000189239 618 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Ighv1-44-201ENSMUST00000195597 352 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm6543-201ENSMUST00000197353 808 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm43968-201ENSMUST00000203388 389 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm8039-201ENSMUST00000204758 712 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm18924-201ENSMUST00000211929 316 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 AC164164.2-201ENSMUST00000221809 785 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm24763-201ENSMUST00000083688 190 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Pcdh1F7BJK1 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.53□□□□□ -1.69
Pcdh1F7BJK1 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm24120-201ENSMUST00000103978 129 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm25316-201ENSMUST00000116826 118 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm16205-201ENSMUST00000117720 1027 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm17014-201ENSMUST00000120765 168 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm4852-201ENSMUST00000121202 729 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm11677-201ENSMUST00000121349 977 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm14977-201ENSMUST00000121626 812 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm24059-201ENSMUST00000157493 312 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm26348-201ENSMUST00000157528 240 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm25902-201ENSMUST00000158493 318 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm10784-201ENSMUST00000178715 238 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Mir7008-201ENSMUST00000184398 63 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm28995-201ENSMUST00000186625 261 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm43215-201ENSMUST00000199108 252 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm44858-201ENSMUST00000207360 154 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm3086-202ENSMUST00000221248 310 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 AC123665.6-201ENSMUST00000228568 538 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Snord68-201ENSMUST00000082516 86 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm25929-201ENSMUST00000082784 107 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdh1F7BJK1 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms